PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g960610.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family MYB_related
Protein Properties Length: 101aa    MW: 11394.5 Da    PI: 3.9892
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g960610.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding231.8e-07755347
                      SS-HHHHHHHHHHHHHTTTT.....-HHHHHHHHTTTS-HHHHHHHHHHH CS
   Myb_DNA-binding  3 rWTteEdellvdavkqlGgg.....tWktIartmgkgRtlkqcksrwqky 47
                       WT eE + +  a++ +  +      W++++  ++ g++  q+k+++  +
  Pd.00g960610.m01  7 EWTREENKAFEIAIATHNIEciekgEWEKVSLSVP-GKSIDQIKLHFMHL 55
                      7*****************99***************.**********9876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 101 aa     Download sequence    
MAGAIDEWTR EENKAFEIAI ATHNIECIEK GEWEKVSLSV PGKSIDQIKL HFMHLLMDVE  60
AIESDQGPLP DYKYDEDEND GDDGNDGDHG DTKEKEMSMV P
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49010.16e-16MYB family protein