PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g958670.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family MYB_related
Protein Properties Length: 105aa    MW: 12488.6 Da    PI: 10.4529
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g958670.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding491.4e-152263144
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHH CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrw 44
                      r rWT+eE++++++a k++G   W++I +++g ++t+ q++s++
  Pd.00g958670.m01 22 RERWTEEEHKKFLEALKLYGRA-WRKIEEHVG-TKTAVQIVSFF 63
                      78******************88.*********.********987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 105 aa     Download sequence    
MRSSFSRINM MARKPYTITK QRERWTEEEH KKFLEALKLY GRAWRKIEEH VGTKTAVQIV  60
SFFSASRFQF TLKVLLQNYV SYAIYLFVVG LAICFEGRAL LVNWD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G17300.16e-28MYB_related family protein