PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g957140.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 329aa MW: 36818.3 Da PI: 4.4567 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 59.7 | 4.6e-19 | 94 | 148 | 3 | 57 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 k++++t +q++ Le+ F +++++ e++ LAk lgL+ rqV +WFqNrRa++k+ Pd.00g957140.m01 94 KKRRLTVDQVQFLEKSFDMENKLEPERKILLAKDLGLQPRQVAIWFQNRRARWKN 148 56689************************************************95 PP | |||||||
2 | HD-ZIP_I/II | 127.5 | 5.7e-41 | 94 | 183 | 2 | 91 |
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 kkrrl+ +qv++LE+sF++e+kLeperK la++Lglqprqva+WFqnrRAR+k+kqlEkdye+L+++y++lk++ e+L ke+e+L++e+ Pd.00g957140.m01 94 KKRRLTVDQVQFLEKSFDMENKLEPERKILLAKDLGLQPRQVAIWFQNRRARWKNKQLEKDYEVLQANYNSLKADCESLAKENEKLKAEV 183 9**************************************************************************************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 329 aa Download sequence |
MAGGRVYSRG ASSSSLSVLL QNQRGPCASE PLDSLFLSGS SNSSSASPFL GSRSMVSFED 60 VRGGNGSNRS LFHQYEHEDN GDDDLDEYFH QPGKKRRLTV DQVQFLEKSF DMENKLEPER 120 KILLAKDLGL QPRQVAIWFQ NRRARWKNKQ LEKDYEVLQA NYNSLKADCE SLAKENEKLK 180 AEVLVLSEKL PHKEKESGTS ELSDTNKVSQ EPTQNPTADS LSECEVSKVS AVASKQEDLS 240 SGKSDIFDSD SPHYTDGVHS SILEPGDSSY VFEPDQSDLS QDEEDNLSKS LLPPYIFPKL 300 EDVDYSDTPA NSCNFGFPVE DHAFWSWSY |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 142 | 150 | RRARWKNKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G01470.1 | 1e-43 | HD-ZIP family protein |