PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g952160.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | ERF | ||||||||
Protein Properties | Length: 240aa MW: 26589 Da PI: 5.8252 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 52.6 | 1.2e-16 | 59 | 110 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 + y+GVr++ + +Wv+e r+p++ k+ r++lg++ tae+Aa+a++ a++++ g Pd.00g952160.m01 59 PVYRGVRRRN-NDKWVCEMREPKK--KKSRIWLGTYPTAEMAARAHDVAALAFSG 110 68*****887.8*********844..46**********************98766 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 240 aa Download sequence |
MDMSFSQLSD SVDQPESSSL SDASVTTQGA SCSDGDVILA SSRPKKRAGR RVFKETRHPV 60 YRGVRRRNND KWVCEMREPK KKKSRIWLGT YPTAEMAARA HDVAALAFSG KLACINFADS 120 AWRLPLPASM DTMDIRRAAA EAAEGFRPAE FGGVCSGSSD EKESMVVQVE EKNKKGSVNL 180 ERSRSLSLSY WDEDEVFDMP RLLHDMAEGL LLSPSQCLGG YMNLDDMGTD ADVKLWSFSI |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 65 | 83 | RRRNNDKWVCEMREPKKKK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G25480.1 | 1e-55 | ERF family protein |