PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g945730.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | C2H2 | ||||||||
Protein Properties | Length: 247aa MW: 28086.9 Da PI: 9.4679 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 13.9 | 0.00015 | 95 | 117 | 2 | 23 |
EETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 2 kCpdCgksFsrksnLkrHirt.H 23 +C+ C+++++++ +L H++ H Pd.00g945730.m01 95 SCSVCSRVYPTSRLLSIHLSEaH 117 6******************9888 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 247 aa Download sequence |
MASMDVEGPQ LGFPHWKPLR RRFGPESPFF ASGNIERELL AKQLALDLTE HERHQLRNMV 60 DEEGRGVFCT IVGCGARLSS LEDFEDHYNA RHTASCSVCS RVYPTSRLLS IHLSEAHDSF 120 FQAKVARGYP MYECLVEGCD LKFKNYKSRQ QHLVDKHKFP TSFEFFKKAQ PSKKQRQKNQ 180 RKQAIPKKAD ASCMEVENET IDSLVSAVSK LSTSDSSPSS ISFGRRPTRG LTFVPRAVQR 240 EKKPDST |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 173 | 179 | KKQRQKN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G14140.1 | 1e-104 | C2H2 family protein |