PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g940850.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | WRKY | ||||||||
Protein Properties | Length: 220aa MW: 24009.4 Da PI: 6.0207 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 99.2 | 2.5e-31 | 44 | 102 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 D ++WrKYGqK++kgs++pr+YYrC+s+ gC+++k+ver+++dp+++++tY+ eHnh+ Pd.00g940850.m01 44 ADIWAWRKYGQKPIKGSPYPRGYYRCSSSkGCMARKQVERNRSDPNMFIVTYTAEHNHP 102 69*************************998****************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 220 aa Download sequence |
MEDDWDLQAV PSSHSVSSTT TPRSKKRKNQ LKKVCQVPAE SLSADIWAWR KYGQKPIKGS 60 PYPRGYYRCS SSKGCMARKQ VERNRSDPNM FIVTYTAEHN HPAPTHRNSL AGSTRQKPFS 120 PQNVTGSDST KPTSPATSAS VDEDPGVPQS TTMESFKEEK GSPMVDDDDE ELFGMCDSVV 180 SDDFFVGLEG LAGDYFSDHS PTSFGVPWVS SNAATAAGSI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G01250.1 | 8e-73 | WRKY family protein |