PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g938550.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB_related

Protein Properties

Length: 558aa MW: 61781.9 Da PI: 8.7855

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g938550.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	46.9	6.5e-15	90	134	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r rWT eE+ ++++a k++G W +I +++g ++t q++s+ qk+ Pd.00g938550.m01 90 RERWTHEEHNKFLEALKLYGRA-WQRIEEHIG-TKTTVQIRSHAQKF 134 78****************88.*****.**********98 PP

Sequence ? help Back to Top
Protein Sequence Length: 558 aa Download sequence
MAGLRLRWFP QPNSMPLYTL SVEFVRLPSI FEPFPSTNEN YAFSGECPAS YWSLSHNPSS 60 SRKLSIRHGF LRREDLAIKA RKPYTITKQR ERWTHEEHNK FLEALKLYGR AWQRIEEHIG 120 TKTTVQIRSH AQKFFSKTDK KLFHYQLEKE AHVNGVPIGQ SIGIDIPPPR PKRKPCNPYP 180 RKSSSAASTC ATLHVGAKRP FGEEKANNAE NQVANWAEVF TLLQDGHCSS VSSANNNSIP 240 SQVALGNACT LRDATNESYV TIKLKGNQNL KKIDAKMIVG DNGTSGAPKS GNINNAFHKE 300 LVQGEKFSSL IVSSLLQNPA AHAVASSTAA FWPYTNAKNR KDPPNMAAIA AATVTAATAW 360 SAVHRLLPRQ TDFSCSPISV TGVPVPSMDT GQAPPANREK GESSLQIPSL QDQQLDSRHT 420 EAVEAQHSNI AKANTDDEKE VASTEEVHDS NHAKSRKQVD RSSYGSNTPS DSEDETAAIE 480 KNEKGKEELK EPNTSHPAAE SSQRRSRCVS NMYDSWKEVS EEGRLAFHAL FSRDVLPQSF 540 SLTQDLKIKG HQNDGMED

Sequence ? help Back to Top

Protein Sequence Length: 558 aa Download sequence

MAGLRLRWFP QPNSMPLYTL SVEFVRLPSI FEPFPSTNEN YAFSGECPAS YWSLSHNPSS  60
SRKLSIRHGF LRREDLAIKA RKPYTITKQR ERWTHEEHNK FLEALKLYGR AWQRIEEHIG  120
TKTTVQIRSH AQKFFSKTDK KLFHYQLEKE AHVNGVPIGQ SIGIDIPPPR PKRKPCNPYP  180
RKSSSAASTC ATLHVGAKRP FGEEKANNAE NQVANWAEVF TLLQDGHCSS VSSANNNSIP  240
SQVALGNACT LRDATNESYV TIKLKGNQNL KKIDAKMIVG DNGTSGAPKS GNINNAFHKE  300
LVQGEKFSSL IVSSLLQNPA AHAVASSTAA FWPYTNAKNR KDPPNMAAIA AATVTAATAW  360
SAVHRLLPRQ TDFSCSPISV TGVPVPSMDT GQAPPANREK GESSLQIPSL QDQQLDSRHT  420
EAVEAQHSNI AKANTDDEKE VASTEEVHDS NHAKSRKQVD RSSYGSNTPS DSEDETAAIE  480
KNEKGKEELK EPNTSHPAAE SSQRRSRCVS NMYDSWKEVS EEGRLAFHAL FSRDVLPQSF  540
SLTQDLKIKG HQNDGMED

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46830.1	2e-65	MYB_related family protein