PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g937420.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | HSF | ||||||||
Protein Properties | Length: 209aa MW: 23987.8 Da PI: 4.8867 | ||||||||
Description | HSF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HSF_DNA-bind | 112.3 | 3.3e-35 | 22 | 113 | 2 | 102 |
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkell 94 Fl k+y ++ed++++++isw+++g++fvv+++ efa+++Lp+ Fkhsnf+SFvRQLn+YgF+kv++++ weF +++F+kg+k++l Pd.00g937420.m01 22 FLLKTYMLVEDPATDDVISWNDDGSAFVVWQPAEFARDLLPTLFKHSNFSSFVRQLNTYGFRKVSTSR---------WEFCNDKFRKGEKDQL 105 9****************************************************************999.........**************** PP XXXXXXXX CS HSF_DNA-bind 95 ekikrkks 102 ++i+r+k Pd.00g937420.m01 106 CDIRRRKA 113 *****985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 209 aa Download sequence |
MEGVCDQKGL LEYVRKSSPP PFLLKTYMLV EDPATDDVIS WNDDGSAFVV WQPAEFARDL 60 LPTLFKHSNF SSFVRQLNTY GFRKVSTSRW EFCNDKFRKG EKDQLCDIRR RKAWASKQQP 120 INNIALNQAA QAMPNQDEFD EDQRSNSSTS SSSDYSSLVD ENKRLKQENG VLSSELTSMK 180 RKCKELLDLV VKYGDSAEKE EENSILEAF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G41690.1 | 6e-64 | HSF family protein |