PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g934480.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family MYB
Protein Properties Length: 279aa    MW: 30453 Da    PI: 7.1258
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g934480.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding31.25.1e-10654347
                      SS-HHHHHHHHHHHHHTTTT.....-HHHHHHHHTTTS-HHHHHHHHHHH CS
   Myb_DNA-binding  3 rWTteEdellvdavkqlGgg.....tWktIartmgkgRtlkqcksrwqky 47
                       W +eEd+ + +a++++  +     +W++Ia+ ++  ++ +++k ++q++
  Pd.00g934480.m01  6 VWNKEEDKAFENAIAMHWIDeeseeQWEKIAELVP-SKSMEELKQHYQML 54
                      6**********************************.************86 PP
2Myb_DNA-binding40.94.8e-13106150347
                       SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
   Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                       +WT+eE+ l++ + +++G+g+W++I+r +   Rt+ q+ s+ qky
  Pd.00g934480.m01 106 PWTEEEHRLFLLGLEKFGKGDWRSISRNFVISRTPTQVASHAQKY 150
                       7*****************************99************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 279 aa     Download sequence    
MSSASVWNKE EDKAFENAIA MHWIDEESEE QWEKIAELVP SKSMEELKQH YQMLVGDVSA  60
IEAGHTPLPN YAAAEEATSS TLAHDTSGHG GKGGSRSDQE RKKGIPWTEE EHRLFLLGLE  120
KFGKGDWRSI SRNFVISRTP TQVASHAQKY FIRLNSMNRD RRRSSIHDIT SVNNGDVSSH  180
QPPITGQQTN TYAPSAAAAG ATTIGVGPQS VKHRAHQPHM AGLGMYGAPM GHPVSAPPGH  240
HMGSAVGTPV MLPPGHHPHT HPPYVVPVAY PMAHPTMHQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49010.11e-78MYB family protein