PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g931130.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family GATA
Protein Properties Length: 309aa    MW: 34476.5 Da    PI: 7.7008
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g931130.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA59.25.5e-19231264134
              GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                       C +C +tkTp+WR+gp g+ktLCnaCG++yr+ +
  Pd.00g931130.m01 231 CMHCAVTKTPQWREGPLGPKTLCNACGVRYRSGR 264
                       99*****************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 309 aa     Download sequence    
MTAVSADVTK LTKRENISAM ASSMPTDDNF NIESFLPDEL KALDFPMEDI EECVEDEDWY  60
AEFQNLEPPS FEDLFCPRVL DGNDDVKPKN LSTSYGQTSQ RNQLPRTAAK TTRGISSIRS  120
EDLESIGSCA AQFEPKFEKR TRSKLSRSKR SSPAIFNTQF FPSTSSNSSA SENLYHWDAS  180
ESDLEGSLTE EMSNAAKRKQ KKKRNLSQLS SAAMRKLSQE EPGESRETKR CMHCAVTKTP  240
QWREGPLGPK TLCNACGVRY RSGRLFPEYR PAASPTFVAS VHSNSHKKVI ELRNKGCQGA  300
TMGILSSAQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54810.22e-38GATA family protein