PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g929480.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family B3
Protein Properties Length: 293aa    MW: 34006.3 Da    PI: 4.7029
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g929480.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3474.7e-15691899
                      -HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
                B3  8 sdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99
                      + + + +rl++pk f+++hg+    s ++ l+ +sg + e+kl  r++ g+++++kGW eF k   L+ g  +vF+++g+s+f  +v +f++
  Pd.00g929480.m01  6 NTNARDKRLRVPKAFMDKHGEH--LSDQIHLKLPSGSESEIKL--RRCAGEFWFEKGWPEFSKFCSLDFGSCLVFRYEGKSKF--HVLIFDE 91
                      45667789***********955..8889***************..*********************************99999..***9986 PP
2B338.32.4e-122162921798
                       E--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
                B3  17 vlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                        +p +f +++  +  +++t++l     r W v+l    +++ y +++GW  F kan LkegD+++F+l+++++  l v +fr
  Pd.00g929480.m01 216 HVPASFRKHFTPV--KNQTVRLLV-GDRLWPVTL--IFHPQNYRFSAGWGAFEKANWLKEGDICIFELMDKRNLVLEVNIFR 292
                       5788886555544..455788776.679******..66777799************************99888889998887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 293 aa     Download sequence    
MKTIMNTNAR DKRLRVPKAF MDKHGEHLSD QIHLKLPSGS ESEIKLRRCA GEFWFEKGWP  60
EFSKFCSLDF GSCLVFRYEG KSKFHVLIFD ESGTEIEYPI MPQVEGTDEE EDDDMSVEEI  120
WEIEDDEEDN DESVESLEIE TDESLEILLI DEDDDDDDVK SVESLEFFPL SQEKNRRKPR  180
SSSKPSSLRA TVKAANKFVA SHPFFKITLG PSRKAHVPAS FRKHFTPVKN QTVRLLVGDR  240
LWPVTLIFHP QNYRFSAGWG AFEKANWLKE GDICIFELMD KRNLVLEVNI FRC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49475.13e-21B3 family protein