PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g929220.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

TCP

Protein Properties

Length: 315aa MW: 32306.8 Da PI: 5.8252

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g929220.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	83.6	4.9e-26	1	84	24	113
TCP 24 lsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssgkaaksaakskksqksaasalnlake 113 ++a+caar+F+L++eL +++d++tieWLlqqa+pai+++tgt++++a+++ + s +ss+s+ s++ +sk++++s al+la++ Pd.00g929220.m01 1 MPATCAARVFQLTRELSHKSDGETIEWLLQQAEPAIIAATGTGTIPANFSsLNISLRSSGSTLSAP-------PSKSASHSFPGALALAHH 84 9**********************************************9997666777776644443.......333333333333444443 PP

Sequence ? help Back to Top
Protein Sequence Length: 315 aa Download sequence
MPATCAARVF QLTRELSHKS DGETIEWLLQ QAEPAIIAAT GTGTIPANFS SLNISLRSSG 60 STLSAPPSKS ASHSFPGALA LAHHPHYDEE ALPSGGGDSG GGDSTDSYMR KRFREDLFKD 120 DNQGRGEGGG GSSGGGGSPS GNKAFKSSGG LQLQKQQQGS EGEAGPSGLL RPPSNILPPT 180 AMWAVAPAPN SGAAGSTFWM LPVTAGAGGP SMPTGTSGAG PSEAAQMWTF PSAPASHGST 240 LQAPLHFMPR FNLPSSLEFQ QAGSRGNPLQ LGSMLMQQQP SQHLGLGVAD SNLGMLAALN 300 ASYSRDLEVE FEMMG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G35560.1	4e-39	TCP family protein