PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g914660.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB_related

Protein Properties

Length: 454aa MW: 49839.5 Da PI: 7.1881

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g914660.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	51.8	1.8e-16	59	103	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r +WT+eE+ ++++a k++G g W+ I +++g ++t+ q++s+ qk+ Pd.00g914660.m01 59 REKWTEEEHHKFLEALKLYGRG-WRQIEEHVG-TKTAVQIRSHAQKF 103 789*****************.*****.**********98 PP

Sequence ? help Back to Top
Protein Sequence Length: 454 aa Download sequence
MAVEDYSEAT GSNASVAAAD CSLKGDAQSK PVIELKEISS FGNDHTPKIR KPYTITKQRE 60 KWTEEEHHKF LEALKLYGRG WRQIEEHVGT KTAVQIRSHA QKFFSKVSKE SSGPSEGSIT 120 PIEIPPPRPK RKPVHPYPRK SVDSLIGSPE RSPSPHFSVS GKGQESPTSV LSALGSDVLG 180 SAALDQPSRS ATPTSCTTDM RSTILSHVEK ENDYMTSNSS TEEVKESVPS VQLSADSTPE 240 KFACMKHGSG SNHIVSTEGD AGSPRASPSI KLFGRTVLVS DLDRQSPPGS VTKDSKAKQE 300 NWQRENDKLA QTLRLDELDT RLSLGGIVEH QKQSPNSQEV NPDAPPPWWF MHNGLIPFFQ 360 VRSCNQNSVQ IQANSCADET MKETETSLSH DGSVSAVEIL AEKHLEAADA LREETRSLPC 420 SSRKGFAPYK RCLADRNMNS SGEMRDRQRA RVCS

Sequence ? help Back to Top

Protein Sequence Length: 454 aa Download sequence

MAVEDYSEAT GSNASVAAAD CSLKGDAQSK PVIELKEISS FGNDHTPKIR KPYTITKQRE  60
KWTEEEHHKF LEALKLYGRG WRQIEEHVGT KTAVQIRSHA QKFFSKVSKE SSGPSEGSIT  120
PIEIPPPRPK RKPVHPYPRK SVDSLIGSPE RSPSPHFSVS GKGQESPTSV LSALGSDVLG  180
SAALDQPSRS ATPTSCTTDM RSTILSHVEK ENDYMTSNSS TEEVKESVPS VQLSADSTPE  240
KFACMKHGSG SNHIVSTEGD AGSPRASPSI KLFGRTVLVS DLDRQSPPGS VTKDSKAKQE  300
NWQRENDKLA QTLRLDELDT RLSLGGIVEH QKQSPNSQEV NPDAPPPWWF MHNGLIPFFQ  360
VRSCNQNSVQ IQANSCADET MKETETSLSH DGSVSAVEIL AEKHLEAADA LREETRSLPC  420
SSRKGFAPYK RCLADRNMNS SGEMRDRQRA RVCS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G18330.1	6e-51	MYB_related family protein