PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g909500.m02 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | MYB_related | ||||||||
Protein Properties | Length: 448aa MW: 50966.2 Da PI: 8.8741 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 30.9 | 6.2e-10 | 393 | 441 | 2 | 47 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqky 47 ++W+ E++ l +v+q+G g+Wk+I + Rt ++k++w+++ Pd.00g909500.m02 393 NKWSSLEEDTLRAGVEQYGVGRWKLILTSNQdifGERTQVDLKDKWRNL 441 58********************************99***********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 448 aa Download sequence |
MKRSLLHSVA SNHDVAAVEG YIGKTGWMFV PQYCQTGHNF GAFAKDVPKS QNFTVGDATL 60 NQTEVYDGFS QVFSPDSSQE EVYEKMMKPL VEVFLKGKSG MLAAFGPGGS GKTHTIFGCN 120 KQPGGGHLIF HCKHRIMSLF ISIFEIRCEG GKEERVFDLS PNGVDLTMHR STLKGLHEGI 180 NQIPSHKSNG EVNDQANDGV LSIVDLAGAE REKRTGNQRV RLLESNFINK TSVVFCLCLR 240 VCSLKSLSEH QKNPLKPLEK HFQDSLLTKY LRAYMEGNKR MALILTVKAG GEDYHNTSCL 300 LKQSSLYMEI KFNNEPSKRR LSPSFVLKGY KEKLEVAEEI QRLRESNLEL ENEVKDLKSL 360 VEVQRSGDVQ PKKECYFPIE EDKERLARRR KVNKWSSLEE DTLRAGVEQY GVGRWKLILT 420 SNQDIFGERT QVDLKDKWRN LIRWNMHQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G58340.2 | 1e-09 | MYB_related family protein |