PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g909500.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB_related

Protein Properties

Length: 443aa MW: 50435.5 Da PI: 8.8324

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g909500.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	30.9	6.1e-10	388	436	2	47
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqky 47 ++W+ E++ l +v+q+G g+Wk+I + Rt ++k++w+++ Pd.00g909500.m01 388 NKWSSLEEDTLRAGVEQYGVGRWKLILTSNQdifGERTQVDLKDKWRNL 436 58******************************99*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 443 aa Download sequence
MKRSLLHSVA SNHDVAAVEG YIGKTGWMFV PQYCQTGHNF GAFAKDVPKS QNFTVGDATL 60 NQTEVYDGFS QVFSPDSSQE EVYEKMMKPL VEVFLKGKSG MLAAFGPGGS GKTHTIFGCN 120 KQPGGGHLIF HCKHRIMSLF ISIFEIRCEG GKEERVFDLS PNGVDLTMHR STLKGLHEGI 180 NQIPSHKSNG EVNDQANDGV LSIVDLAGAE REKRTGNQRV RLLESNFINK TSVVFCLCLR 240 SLSEHQKNPL KPLEKHFQDS LLTKYLRAYM EGNKRMALIL TVKAGGEDYH NTSCLLKQSS 300 LYMEIKFNNE PSKRRLSPSF VLKGYKEKLE VAEEIQRLRE SNLELENEVK DLKSLVEVQR 360 SGDVQPKKEC YFPIEEDKER LARRRKVNKW SSLEEDTLRA GVEQYGVGRW KLILTSNQDI 420 FGERTQVDLK DKWRNLIRWN MHQ

Sequence ? help Back to Top

Protein Sequence Length: 443 aa Download sequence

MKRSLLHSVA SNHDVAAVEG YIGKTGWMFV PQYCQTGHNF GAFAKDVPKS QNFTVGDATL  60
NQTEVYDGFS QVFSPDSSQE EVYEKMMKPL VEVFLKGKSG MLAAFGPGGS GKTHTIFGCN  120
KQPGGGHLIF HCKHRIMSLF ISIFEIRCEG GKEERVFDLS PNGVDLTMHR STLKGLHEGI  180
NQIPSHKSNG EVNDQANDGV LSIVDLAGAE REKRTGNQRV RLLESNFINK TSVVFCLCLR  240
SLSEHQKNPL KPLEKHFQDS LLTKYLRAYM EGNKRMALIL TVKAGGEDYH NTSCLLKQSS  300
LYMEIKFNNE PSKRRLSPSF VLKGYKEKLE VAEEIQRLRE SNLELENEVK DLKSLVEVQR  360
SGDVQPKKEC YFPIEEDKER LARRRKVNKW SSLEEDTLRA GVEQYGVGRW KLILTSNQDI  420
FGERTQVDLK DKWRNLIRWN MHQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G58340.2	1e-09	MYB_related family protein