PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g905880.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family MYB_related
Protein Properties Length: 307aa    MW: 33567.8 Da    PI: 7.1708
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g905880.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding422.1e-1363107347
                       SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
   Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                       +WT+eE+  ++ + ++lG+g+W+ Iar   ++Rt+ q+ s+ qky
  Pd.00g905880.m01  63 PWTEEEHRMFLIGLQKLGKGDWRGIARNYVTTRTPTQVASHAQKY 107
                       8*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 307 aa     Download sequence    
MKKSASMGNL SSAAHYHSSS PNPDSPSSDL HDPVHVPEGY LSDDPAHASS SGNRRGDRKK  60
GTPWTEEEHR MFLIGLQKLG KGDWRGIARN YVTTRTPTQV ASHAQKYFIR QSNATRRKRR  120
SSLFDMVPDM AMDPPPVPEE QVFLPSCQEA ESEAASSLPS LNLSLSSECK PMETTHEEKV  180
KEPDHEPVMG SNGFPPMIPG FFPAYLPYPF PVWPPSAGPM RELKGGEASH QQVLRPIPIL  240
RKEPVNVDAL VGMSQLSLGD TERGHKEPSP LSLKLLGEPS RQSAFHPNAP AGEPDLSKGK  300
SSAIQAV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G16350.11e-70MYB_related family protein