PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g905710.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family GATA
Protein Properties Length: 307aa    MW: 33245.7 Da    PI: 6.4182
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g905710.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA53.33.9e-17218252135
              GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                       C +C + kTp+WR gp g+ktLCnaCG++y++ +l
  Pd.00g905710.m01 218 CLHCAAEKTPQWRTGPMGPKTLCNACGVRYKSGRL 252
                       99*****************************9885 PP
Sequence ? help Back to Top
Protein Sequence    Length: 307 aa     Download sequence    
MELPEFYLGG YFDAGAADFL PEKKPATAGD QFTVDDLLDF SNEDALVAEG GFLDPAADSS  60
AVTAVDSCNS SVSGGEPQFS SNRSFSDSQF SGDLCVPHDD LAELEWLSNF VEDSFSAEKD  120
LQALQFLSMT TTKPQTPETS SSSETNQNAP LFHSETPLPG KARSKRSRAA PGDWSTRLLH  180
LITPNDTIKP PKTTTCKKKD GGIGGNSNWG SDSSGRKCLH CAAEKTPQWR TGPMGPKTLC  240
NACGVRYKSG RLVPEYRPAA SPTFVSARHS NSHRKVLELR RQKEVHRSHQ HQFLSQSSIF  300
GVSNGGP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G32890.14e-67GATA family protein