PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g900880.m02 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | MYB_related | ||||||||
Protein Properties | Length: 348aa MW: 38239.9 Da PI: 8.3079 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 42.3 | 1.7e-13 | 78 | 122 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r +WT++E++++++a +++ + Wk+I + +g +t q++s+ qky Pd.00g900880.m02 78 RESWTEQEHDKFLEALQLFDRD-WKKIEAFVG-SKTVIQIRSHAQKY 122 789*****************77.*********.*************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 348 aa Download sequence |
MVSVNPNPAQ GFYLFDPMNM GLPGLNSMPP PTATATTASA ATSTTACTAS STPTNATSLL 60 AEDQSKKIRK PYTITKSRES WTEQEHDKFL EALQLFDRDW KKIEAFVGSK TVIQIRSHAQ 120 KYFLKVQKKG TSEHVPPPRP KRKATHPYPQ KAPKTAVVSQ VPGQFQSSSA LLEHGYVYQP 180 DSSFALGTPV TSATLSSWSY NSVPPVNVSQ ITKDDGRLAG PTVAHNSCYS SSNESNPTTW 240 QMSEKVDRAD PGQPHRVLPD FAQVYKFIGS VFDPNATSHL ERLKELDPIN LETVLLLMRN 300 LSLNLTSPEF EDHRKLLSSY DADSEKAKSD SNCNFSCIGK SENAILSA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G01520.1 | 1e-101 | MYB_related family protein |