PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g894470.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | BBR-BPC | ||||||||
Protein Properties | Length: 330aa MW: 37029.9 Da PI: 10.2803 | ||||||||
Description | BBR-BPC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GAGA_bind | 363.8 | 3.3e-111 | 20 | 330 | 1 | 301 |
GAGA_bind 1 mdddgsre..rnkg.yye..............pa.aslkenlglqlmssiaerdakirernlalsekkaavaerdmaflqrdkalaernkalv 75 mdd ++e r+k yy+ ++ ++l +++++ms+iaerda+irern+al+ek++a+a+r++a+ qrd+ala+r+ a++ Pd.00g894470.m01 20 MDDGRQHEngRHKMdYYRgaaspwnmatqqqaKEpNALV--MNKKIMSIIAERDAAIRERNAALTEKNEALAAREEALRQRDEALAQRDTAMM 110 677666556899988999999999999987653345666..99************************************************** PP GAGA_bind 76 erdnkllalllvenslasalpvgvqvlsgtksidslqqlsepqledsavelreeeklealpieeaaeeakekkkkkkrqrakkpkekkakkkk 168 erdn+++al +++n+ + p g +v +g+k +++ + + l++ + ++++++++a+pi+ ea +++++k+ +++k +++k ++kk Pd.00g894470.m01 111 ERDNAFAALHMRDNA--VNFPLGGGVQRGAKRLHHPSN-HSVTLAEAHYSTKDMHITDAFPISVISAEAVKSRQTKRAKENKASRASKPSRKK 200 ***********9998..5678899999*******8888.889***********************9999999999977777777777776665 PP GAGA_bind 169 kksekskkkvkkesaderskaekksidlvlngvslDestlPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaRiagrKmS 261 +e+ +++ ++++ + k+e+++ dl+ln vs+Dest+PvPvCsCtG++rqCYkWGnGGWqS+CCtt +S+yPLP+++++r+aR++grKmS Pd.00g894470.m01 201 V-GEDLNRQASSDG--IKYKSEWDTHDLGLNLVSFDESTMPVPVCSCTGVPRQCYKWGNGGWQSSCCTTHMSMYPLPQMPNKRHARMGGRKMS 290 5.666666666666..57*************************************************************************** PP GAGA_bind 262 qgafkklLekLaaeGydlsnpvDLkdhWAkHGtnkfvtir 301 +++f++lL++Laa+G+dls p+DLk++WA+HGtn+++ti+ Pd.00g894470.m01 291 GSVFTRLLSRLAADGHDLSIPLDLKEYWARHGTNRYITIK 330 ***************************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 330 aa Download sequence |
MQSADSRRRG QTLAAHNSKM DDGRQHENGR HKMDYYRGAA SPWNMATQQQ AKEPNALVMN 60 KKIMSIIAER DAAIRERNAA LTEKNEALAA REEALRQRDE ALAQRDTAMM ERDNAFAALH 120 MRDNAVNFPL GGGVQRGAKR LHHPSNHSVT LAEAHYSTKD MHITDAFPIS VISAEAVKSR 180 QTKRAKENKA SRASKPSRKK VGEDLNRQAS SDGIKYKSEW DTHDLGLNLV SFDESTMPVP 240 VCSCTGVPRQ CYKWGNGGWQ SSCCTTHMSM YPLPQMPNKR HARMGGRKMS GSVFTRLLSR 300 LAADGHDLSI PLDLKEYWAR HGTNRYITIK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G21240.1 | 1e-120 | BBR-BPC family protein |