PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g873890.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

TALE

Protein Properties

Length: 640aa MW: 71853.7 Da PI: 7.1498

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g873890.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	27.1	7.1e-09	390	427	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yps ++ LA+++gL+ +qV++WF N R + Pd.00g873890.m01 390 FEHflHPYPSDVDKHILARQTGLSRSQVSNWFINARVR 427 554459******************************88 PP
2	BELL	114	7.8e-37	252	322	2	72
BELL 2 rqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 + elqk+k++Lls+leeV++rYk+y++q+++v+ssFe+vag g+a++Y +lA ka+SrhFr+Lkd i++qi Pd.00g873890.m01 252 FVELQKRKTRLLSMLEEVERRYKHYCDQMKAVVSSFETVAGAGAATVYSALAAKAMSRHFRSLKDGIVSQI 322 679*******************************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 640 aa Download sequence
MVSSSVGFCY SDVSSNPTIH QTQFTNQIQD FGSNPEIFNL TTGMEMIGFP KQNESNNNSA 60 MWKAGFFGKP GNHQAGPSSS KTINESTSSD FYHHQHEFNN KQPDFSTGIS ETSSDHHQNL 120 MVGPQHQDSS GAWQENRFLV DDSSLRDSVG LFGKPSANMQ QQMNMMQDGF LGKATASSSL 180 HPEGLFHLRN SKYLAPAQQL LNEFCSLGTK PSTDHHHPSK QKPHKNKLWE QEDNGTTSSS 240 RNKESNIYSL EFVELQKRKT RLLSMLEEVE RRYKHYCDQM KAVVSSFETV AGAGAATVYS 300 ALAAKAMSRH FRSLKDGIVS QIQVTRKAMG EKDPVAPGTT KGETPRLRIL DQTLRQQRAF 360 QQMNMMESHP WRPQRGLPER SVSVLRAWLF EHFLHPYPSD VDKHILARQT GLSRSQVSNW 420 FINARVRLWK PMVEEMYLEE TKERENNMNN LTSSDGITTD PGDSSRSGQN LLHIRPEDKK 480 PTPDQLVRID SECLSSIITN PDKNHDSRSS KSTLVNHHMH PQQSFGRVNE SFGTMELDFS 540 SYNHHQQHSG GTVSYANDHH HNPNQGFNGG GVSLTLGLQQ HGGNGVSLAF SPASQSSLFY 600 PRDHIEECQP VQYSLLDGEG QNTLPYRNLM GAQLLHDLAG

Sequence ? help Back to Top

Protein Sequence Length: 640 aa Download sequence

MVSSSVGFCY SDVSSNPTIH QTQFTNQIQD FGSNPEIFNL TTGMEMIGFP KQNESNNNSA  60
MWKAGFFGKP GNHQAGPSSS KTINESTSSD FYHHQHEFNN KQPDFSTGIS ETSSDHHQNL  120
MVGPQHQDSS GAWQENRFLV DDSSLRDSVG LFGKPSANMQ QQMNMMQDGF LGKATASSSL  180
HPEGLFHLRN SKYLAPAQQL LNEFCSLGTK PSTDHHHPSK QKPHKNKLWE QEDNGTTSSS  240
RNKESNIYSL EFVELQKRKT RLLSMLEEVE RRYKHYCDQM KAVVSSFETV AGAGAATVYS  300
ALAAKAMSRH FRSLKDGIVS QIQVTRKAMG EKDPVAPGTT KGETPRLRIL DQTLRQQRAF  360
QQMNMMESHP WRPQRGLPER SVSVLRAWLF EHFLHPYPSD VDKHILARQT GLSRSQVSNW  420
FINARVRLWK PMVEEMYLEE TKERENNMNN LTSSDGITTD PGDSSRSGQN LLHIRPEDKK  480
PTPDQLVRID SECLSSIITN PDKNHDSRSS KSTLVNHHMH PQQSFGRVNE SFGTMELDFS  540
SYNHHQQHSG GTVSYANDHH HNPNQGFNGG GVSLTLGLQQ HGGNGVSLAF SPASQSSLFY  600
PRDHIEECQP VQYSLLDGEG QNTLPYRNLM GAQLLHDLAG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G41410.1	1e-142	TALE family protein