PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g862840.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family B3
Protein Properties Length: 419aa    MW: 47716 Da    PI: 8.1977
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g862840.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B335.32.1e-11241081099
                       HHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..EEEEE-S CS
                B3  10 vlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefelvvkvfrk 99 
                       vl+++ l +p + ++++g     + t+ l+ +++ +W ++l  +k+ g+++l++GW++F++   L  g +++F+++g+ s f   v+++ +
  Pd.00g862840.m01  24 VLSKDVLKFPESVVTKYGDC--LGDTVFLKVLNNAVWPIEL--TKRNGQVWLQQGWSNFADFYSLAFGYVLLFSYEGNhSHF--QVRICMR 108
                       57788899999999999755..6679***************..9********************************998888..8888765 PP
2B339.21.2e-121582401299
                       HTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..EEEEE-S CS
                B3  12 ksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefelvvkvfrk 99 
                       + g l +p   + ++g   +   t  ++ ++g  W ++l  ++++++++l++GW eF+k+  L++g f+vF++ g+ s f   +++frk
  Pd.00g862840.m01 158 QDGKLEIPIIAVHTYGDYMAD--TAYFNVPDGSIWPIEL--TRRDREIWLGRGWPEFAKSYSLEDGCFLVFSYAGKcSHF--QLRIFRK 240
                       456677888888777655433..8999************..********************************9966666..9999997 PP
3B357.42.6e-18315414298
                       EEE-..-HHHHTT-EE--HHH.HTT...---..--SEEEEEETTS-EEEEEE..EEETTE....EEE-TTHHHHHHHHT--TT-EEEEEE-SS CS
                B3   2 fkvltpsdvlksgrlvlpkkfaeeh...ggkkeesktltledesgrsWevkliyrkksgr....yvltkGWkeFvkangLkegDfvvFkldgr 87 
                         + +++++ +++ l+++ +f+ +h   +    ++  +tl+ ++ ++W+v++ ++ +sgr     + + GW+ Fv++n+L+egD +vF+l+++
  Pd.00g862840.m01 315 TVIRMQPSYVRNH-LRISSSFVMKHilsD----GECNVTLQISDKKTWSVRCLIDVYSGRrlcaRLQRHGWQAFVRDNQLEEGDACVFELIEK 402
                       5566778888888.***********6432....33479999999********99999999666444459**********************98 PP

                       .SEE..EEEEE- CS
                B3  88 .sefelvvkvfr 98 
                         + +l+v++fr
  Pd.00g862840.m01 403 aPKIKLRVRIFR 414
                       8*********98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 419 aa     Download sequence    
MGSSSRHGKG LAFPVDSRSF FKIVLSKDVL KFPESVVTKY GDCLGDTVFL KVLNNAVWPI  60
ELTKRNGQVW LQQGWSNFAD FYSLAFGYVL LFSYEGNHSH FQVRICMRSP LEIDYFGSTV  120
KEEDNLNGEM DYSNSPESPA SLMNAPSFFK IVLGRTLQDG KLEIPIIAVH TYGDYMADTA  180
YFNVPDGSIW PIELTRRDRE IWLGRGWPEF AKSYSLEDGC FLVFSYAGKC SHFQLRIFRK  240
NTLEMEYNSS SDDTEGNSNT SGDRTEGEKR THGGDGGKTA SHKSSEVDLR TAKLESLKGR  300
AFAKASSFKY DNPFTVIRMQ PSYVRNHLRI SSSFVMKHIL SDGECNVTLQ ISDKKTWSVR  360
CLIDVYSGRR LCARLQRHGW QAFVRDNQLE EGDACVFELI EKAPKIKLRV RIFRDKDQV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18960.18e-17B3 family protein