PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g856770.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB

Protein Properties

Length: 236aa MW: 27751.8 Da PI: 5.6269

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g856770.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	47.4	4.5e-15	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W +eEde+l +v++ G+++W++ a++ g++R++ +c+ rw++yl Pd.00g856770.m01 14 KGPWLEEEDERLTSYVNLKGNRRWDALAKESGLRRSGRSCRMRWLNYL 61 79********************************************97 PP
2	Myb_DNA-binding	53.4	6e-17	71	112	5	48
-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 5 TteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 T eE+++++++++++G++ W++Iar+++ gRt++++k++w++yl Pd.00g856770.m01 71 TVEEEKIILHLHERWGNK-WSKIARMLP-GRTDNEIKNYWRTYL 112 89**************.*****.***********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 236 aa Download sequence
MTCQADMEGE KLRKGPWLEE EDERLTSYVN LKGNRRWDAL AKESGLRRSG RSCRMRWLNY 60 LRPNLKHEHI TVEEEKIILH LHERWGNKWS KIARMLPGRT DNEIKNYWRT YLKKKEPIQD 120 GNFQCTSDKG QHSLFFQEGD MSAEKQYNFN QHHDSVSNIC GAKDTCSDDL GLSEFALTNS 180 LYETRLSDWI SELSSEQSGI NYNQDCNSGE SDLCHLTWTP DDSNRWECPS FLWDMN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G53200.1	6e-62	MYB family protein