PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g855870.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

HSF

Protein Properties

Length: 534aa MW: 59318.7 Da PI: 4.8214

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g855870.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	113.1	1.8e-35	105	196	2	102
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkell 94 Fl+k++++++d++l+++isw + gnsfvv+d+ ef++ +Lp+ Fkh+nf+SFvRQLn+YgF+kv++++ weF ++ Fk+gk++ll Pd.00g855870.m01 105 FLSKTFDLVDDPSLDSIISWGSGGNSFVVWDPLEFSRLILPRNFKHNNFSSFVRQLNTYGFRKVDTDK---------WEFGNEAFKRGKRHLL 188 9**************************************************************999.........************ PP XXXXXXXX CS HSF_DNA-bind 95 ekikrkks 102 +ki+r+ks Pd.00g855870.m01 189 KKIQRRKS 196 ****98 PP

Sequence ? help Back to Top
Protein Sequence Length: 534 aa Download sequence
MNPKDESSPK SPPTSAELDP ENPLRPEMSE PLLGSQSIPS FTCPLMEFEA FCALNPSESS 60 WSSGAFEFDE KAPTATSSFM DAGGAEHVAV PQPLECLQDS PVPPFLSKTF DLVDDPSLDS 120 IISWGSGGNS FVVWDPLEFS RLILPRNFKH NNFSSFVRQL NTYGFRKVDT DKWEFGNEAF 180 KRGKRHLLKK IQRRKSPQSL QVGPSADAGR PRLEGDIETL RKERSMLMQE VGDLQQQQRG 240 TVHHMKVVNE RLQSAEQRQK QMVSFLSKLL QNPAFLARLQ QKTGQKGIDS PRMKRKFVKQ 300 HQHELGKSDS CMQGQIVKYQ PAWRNLSAVP DVNPVVPIEQ SPDNLSQVMA GKLGLVAESK 360 PYQFADVASD ELNLSAEAVM RGFIKTPEQE GEWASSMGAE DPFQKGKSVL SPEQEVNPEY 420 HVCFQEDFGK NKMFPELFSP GIDSMIKQED IWSMGFDVSA GMSSSSNELW SNLVNYDVPE 480 MGVTGGLLDI WDIGPLHAAG GSGIDKRPAD ESAFDEPDSQ AGQLKVDTSK CIDP

Sequence ? help Back to Top

Protein Sequence Length: 534 aa Download sequence

MNPKDESSPK SPPTSAELDP ENPLRPEMSE PLLGSQSIPS FTCPLMEFEA FCALNPSESS  60
WSSGAFEFDE KAPTATSSFM DAGGAEHVAV PQPLECLQDS PVPPFLSKTF DLVDDPSLDS  120
IISWGSGGNS FVVWDPLEFS RLILPRNFKH NNFSSFVRQL NTYGFRKVDT DKWEFGNEAF  180
KRGKRHLLKK IQRRKSPQSL QVGPSADAGR PRLEGDIETL RKERSMLMQE VGDLQQQQRG  240
TVHHMKVVNE RLQSAEQRQK QMVSFLSKLL QNPAFLARLQ QKTGQKGIDS PRMKRKFVKQ  300
HQHELGKSDS CMQGQIVKYQ PAWRNLSAVP DVNPVVPIEQ SPDNLSQVMA GKLGLVAESK  360
PYQFADVASD ELNLSAEAVM RGFIKTPEQE GEWASSMGAE DPFQKGKSVL SPEQEVNPEY  420
HVCFQEDFGK NKMFPELFSP GIDSMIKQED IWSMGFDVSA GMSSSSNELW SNLVNYDVPE  480
MGVTGGLLDI WDIGPLHAAG GSGIDKRPAD ESAFDEPDSQ AGQLKVDTSK CIDP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	188	194	LKKIQRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G03720.1	6e-96	HSF family protein