PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Pd.00g854500.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
|
||||||||
Family | TCP | ||||||||
Protein Properties | Length: 463aa MW: 50521.6 Da PI: 6.9599 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 56 | 1.6e-17 | 36 | 91 | 3 | 58 |
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpa 58 k++r + h+ v+gR RRvR++++c +F L++eLG+ +d+ ti+WLl q p+ Pd.00g854500.m01 36 LKRRRYIDKHSTVNGRHRRVRIPVTCCPGIFRLTQELGHRSDGDTIQWLLSQVRPE 91 6899999*********************************************9987 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 463 aa Download sequence |
MEINQTLPTN TLAITDPPDN PSLQTQPPQQ QEQQQLKRRR YIDKHSTVNG RHRRVRIPVT 60 CCPGIFRLTQ ELGHRSDGDT IQWLLSQVRP ELVLPPQPNN RTRRLPPDPV PQPNCRYPGA 120 AEDGLDHKAV ARLPSVTVRA TVVQASTVFF DTPATLDKAE RLVAGAAAYG SQLVVFPEAF 180 VGGYPRGLMF DSATATLSPE EKQAFEKYYA SAIDVPGPEV DRLAKIASKY KVHLVMGVVE 240 RVGFYLCSTV LFFDSFGQCL GKHPKLLPLA SESPVWCSGA KLPLSVYDTE IGRIGGLVCW 300 DNRMPDLRTQ LYAKGIEIYC APTAEAREIW RSSMTHIALE GGCFVLSANQ FCRRKDYPLP 360 LECVSGDSND ATSLDIICAG GSVIVSPSGT ILAGPNYQGE SLISADLDLV EIARAKLEFG 420 GVGLGHNAGP NAVGWRRTSI PNPDLFAATV KTEVSDHANV LYA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G45680.1 | 1e-16 | TCP family protein |