PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g850820.m02 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | C2H2 | ||||||||
Protein Properties | Length: 401aa MW: 47017.9 Da PI: 7.8278 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 20 | 1.8e-06 | 64 | 85 | 2 | 23 |
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 +C+ Cg +F+ + +Lk+H+++H Pd.00g850820.m02 64 TCQECGVTFRKPAHLKQHMQSH 85 6*******************99 PP | |||||||
2 | zf-C2H2 | 15.9 | 3.8e-05 | 123 | 147 | 1 | 23 |
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 y C+ dC+ s++rk++L+rH+ H Pd.00g850820.m02 123 YICSvdDCHSSYRRKDHLNRHLLQH 147 89*******************9887 PP | |||||||
3 | zf-C2H2 | 13.6 | 0.0002 | 152 | 177 | 1 | 23 |
EEET..TTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirt.H 23 +kCp +C++ F + n++rH + H Pd.00g850820.m02 152 FKCPieNCNREFGFQGNMTRHVNElH 177 89*******************99888 PP | |||||||
4 | zf-C2H2 | 15.5 | 5.1e-05 | 192 | 216 | 1 | 23 |
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 ++C+ Cgk+F+ s L++H +H Pd.00g850820.m02 192 HVCKeiGCGKVFRFASRLRKHEDSH 216 79*******************9888 PP | |||||||
5 | zf-C2H2 | 16 | 3.5e-05 | 283 | 307 | 2 | 23 |
EET..TTTEEESSHHHHHHHHHH.T CS zf-C2H2 2 kCp..dCgksFsrksnLkrHirt.H 23 kC C+ +F++ksnL +H + H Pd.00g850820.m02 283 KCDykGCHHTFTTKSNLAKHVKAvH 307 688889**************99877 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 401 aa Download sequence |
MDKGQAEMEG PIFRDIRRYY CEYCGICRSK KSRITSHILS HHKDEMEMSN VDEDREVEQE 60 KSNTCQECGV TFRKPAHLKQ HMQSHSLEES TYMKYIRWIA WETSCEAPSS EPQSRTVWFE 120 RPYICSVDDC HSSYRRKDHL NRHLLQHQGK LFKCPIENCN REFGFQGNMT RHVNELHSED 180 SPSTNGGAQK QHVCKEIGCG KVFRFASRLR KHEDSHVKLD TVEAFCSEPG CMKHFTNEQC 240 LQAHIHSCHQ HTTCEICGSK QLRNNIKRHL LTHEDKHSIE RIKCDYKGCH HTFTTKSNLA 300 KHVKAVHLEH KPFVCSFSGC GLRFAYKHVR DNHEKTGCHV YTQGDFEEAD EQFRLRPRGG 360 RKRECPDIPM LVRKRVTPPN QLGQESEYMS WLHSQEDNDE Q |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G72050.2 | 1e-143 | C2H2 family protein |