PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g830610.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family GRAS
Protein Properties Length: 627aa    MW: 69451.4 Da    PI: 5.9496
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g830610.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS439.91.8e-1342626261374
              GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlar..svselykalppsetseknsseelaalklfsevsPil 91 
                       lv+lLl+cAeav+++d+ la+++L +l+  ++p gd+mqR+a++fteAL+arl+   +++  ++a +p +  + ns e l+++++ ++++P++
  Pd.00g830610.m01 262 LVHLLLACAEAVAKEDFMLARRYLHHLNRVVTPLGDSMQRVASCFTEALSARLTAtlTTNPAASAPKPFSPFPPNSLEILKIYQIVYQACPYI 354
                       68****************************************************943333444444444444567****************** PP

              GRAS  92 kfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvak 184
                       kf+h+taNqaI ea+e+eervH+iD+di qG QWpa++qaLa+Rp+g+p lRiTgvg+      e+++etg+ L+++A +l+vpfef++ v +
  Pd.00g830610.m01 355 KFAHFTANQAIFEAFESEERVHVIDLDILQGYQWPAFMQALAARPGGAPFLRITGVGP----CIEAVKETGRCLTELALSLHVPFEFHA-VGE 442
                       **********************************************************....***************************.7** PP

              GRAS 185 rledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpr 277
                       +ledl++++++ + gEalaVn v +lhr++       ++  +vL ++++  P++v++veqea+hn++ Fl rfleal+yysa+fdsl+a++p+
  Pd.00g830610.m01 443 QLEDLKPHMFNRRIGEALAVNTVNRLHRVP------GNYLGNVLAMIRDQAPNIVTLVEQEASHNGPYFLGRFLEALHYYSAIFDSLDATFPP 529
                       *****************************9......444557*************************************************** PP

              GRAS 278 eseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsv 370
                       +s +r+kvE+ ++++ei+n+vacegaer+erhe+lekWr+ +e+ GFk+v+ls +a++q k ll  ++ dgyr+ e++g+l+lgW+dr+++++
  Pd.00g830610.m01 530 DSAQRAKVEQYIFAPEIRNIVACEGAERTERHERLEKWRKVMESKGFKSVALSANAVTQSKILLGLYSCDGYRMTEDKGCLLLGWQDRSIMAA 622
                       ********************************************************************************************* PP

              GRAS 371 SaWr 374
                       SaWr
  Pd.00g830610.m01 623 SAWR 626
                       ***8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 627 aa     Download sequence    
MGSIKSEISC TSDLKPPSPN ESTTMSISMS ESKKTTTPPS SEMEQSSLTP PSLNFPTLKF  60
ELDGDVEVQS PDHSIWESLF SEQFDTDFMV LSPVPNNMPD SPQPGASLSA AHNNYNYYNY  120
AQSMQGQSLS GCSPPRFSPH LGAFSSTHNP KGKGLSPLRR VFNSPVNQYM QPADQNMQSM  180
PPASIEDFLD DYQRDSFIAA YQNPTTTTTT TSSSKMSGTS SQSYNPHDMQ TSSTVPAAPL  240
DCLPMQNSSR FSRSEQDSGL QLVHLLLACA EAVAKEDFML ARRYLHHLNR VVTPLGDSMQ  300
RVASCFTEAL SARLTATLTT NPAASAPKPF SPFPPNSLEI LKIYQIVYQA CPYIKFAHFT  360
ANQAIFEAFE SEERVHVIDL DILQGYQWPA FMQALAARPG GAPFLRITGV GPCIEAVKET  420
GRCLTELALS LHVPFEFHAV GEQLEDLKPH MFNRRIGEAL AVNTVNRLHR VPGNYLGNVL  480
AMIRDQAPNI VTLVEQEASH NGPYFLGRFL EALHYYSAIF DSLDATFPPD SAQRAKVEQY  540
IFAPEIRNIV ACEGAERTER HERLEKWRKV MESKGFKSVA LSANAVTQSK ILLGLYSCDG  600
YRMTEDKGCL LLGWQDRSIM AASAWRC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66350.17e-97GRAS family protein