PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g830510.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

TCP

Protein Properties

Length: 323aa MW: 34415.6 Da PI: 7.2355

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g830510.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	126.9	2e-39	88	173	2	87
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssasnsss 87 a+k+++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++ti+WLlqqa+p+i+++tgt++++as+ +a+ s+s++ s Pd.00g830510.m01 88 APKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPSIIAATGTGTIPASALTAAGGSVSQQGTSL 173 789******************************************************************99955555555543333 PP

Sequence ? help Back to Top
Protein Sequence Length: 323 aa Download sequence
MRCQVSESQA SSLAVESLTR EEMASYIGCC CNYYRNAMQC SAGGEIIIMK GEEREGGGIH 60 GWMDGWTMVW SICYDSMEYK EEGKKQLAPK RSSNKDRHTK VEGRGRRIRM PALCAARIFQ 120 LTRELGHKSD GETIQWLLQQ AEPSIIAATG TGTIPASALT AAGGSVSQQG TSLSAGLHQK 180 IDELGGSSIG SGSRTSWAMV GGNLGRPHVA TGLWPPVSSF GFQSSSGPST TNLGSESSNY 240 MQKIGFPGFD LPVSNMGPMS FTSILGGGSN QQLPGLELGL SQDGHIGVLN SQALSQIYQQ 300 MGHARVHQHQ QPPAKDDSQG SGQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G27010.1	4e-73	TCP family protein