PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g828500.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | MYB_related | ||||||||
Protein Properties | Length: 179aa MW: 20214.5 Da PI: 9.1123 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 53 | 7.8e-17 | 79 | 125 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT++Ed llv++v ++G + W+ Ia+++ gR +kqc++rw+++l Pd.00g828500.m01 79 KGQWTPQEDRLLVQLVGRFGIKKWSQIAKMLS-GRVGKQCRERWHNHL 125 799*****************************.*************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 179 aa Download sequence |
MGPQSCIQLP PLINFGELGS SSAMAISLPS DEVTCNSSSS TEIEFCKRLS ADDQKKTKRL 60 CMRRPTSSKV LQKKPSIIKG QWTPQEDRLL VQLVGRFGIK KWSQIAKMLS GRVGKQCRER 120 WHNHLRPDIR VTGVEEYRGN SMEAEMPLAL EVKSLMQGPD DDHVKKEMDL LEMICQGKL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G27785.1 | 1e-32 | MYB family protein |