PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g826990.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | AP2 | ||||||||
Protein Properties | Length: 206aa MW: 22843.2 Da PI: 4.512 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 30.8 | 7.5e-10 | 19 | 57 | 16 | 55 |
AP2 16 vAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +A+I + n+ +k+ +lg++ t eeAa+a++ a+ +++g Pd.00g826990.m01 19 RARIGRvF-GNN-KKYLYLGTYSTQEEAARAYDIAAIEYRG 57 57777745.343.7*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 206 aa Download sequence |
MFVWSMQKFD QIYEMERSRA RIGRVFGNNK KYLYLGTYST QEEAARAYDI AAIEYRGISA 60 VTNFDLTTSQ QRSLSHTQIL LPLITSTPPR KQEVIGSNIP LNTGSKSSSP TALGLLLQSS 120 IFRELVQKNS NFSEDESTDG EETKDQPQVG SDDEFGGIFY DGIGDNPFAC SSNSDGDNKP 180 WSSITSTILL NQPTKANASD SLFFFS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G57390.1 | 9e-18 | AP2 family protein |