PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g819360.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | Dof | ||||||||
Protein Properties | Length: 279aa MW: 30573.4 Da PI: 4.7234 | ||||||||
Description | Dof family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 119.9 | 9.3e-38 | 34 | 88 | 6 | 60 |
zf-Dof 6 lkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkk 60 +cprC s+ntkfCyynnyslsqPryfCk+CrryWtkGG+lrnvPvGgg+rkn++ Pd.00g819360.m01 34 PNCPRCASSNTKFCYYNNYSLSQPRYFCKGCRRYWTKGGSLRNVPVGGGCRKNRR 88 58***************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 279 aa Download sequence |
MFSAPVEQML QCPSGPFIMM DKRSWNKPHI EVAPNCPRCA SSNTKFCYYN NYSLSQPRYF 60 CKGCRRYWTK GGSLRNVPVG GGCRKNRRGK AAKLSQADRA SMSCFNHNSS SSDDTSGQYS 120 SGTDNQPGGG NGSDIDLAAV FAKFLNNSSS PADEHDHLDQ DHEPNLVISS SELNDLDGSQ 180 NSSKADQDLV EAVDHLLGGL GLLGNDDQVV QDVFWSDDAA TTSSLTSSTA SFSWQPMVHL 240 QELDYSLPSD DDHMKIPTNL CSDNWSSFDF SGFEVFSRS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G52440.1 | 4e-40 | Dof family protein |