PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g810000.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | MYB | ||||||||
Protein Properties | Length: 355aa MW: 39922.4 Da PI: 6.2905 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 38 | 4e-12 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg WT+eEd +++ ++G+ +W++ +++ g++R++k+c+ rw +yl Pd.00g810000.m01 14 RGLWTEEEDAKILAHGSKHGNINWTAFPKKAGLTRCGKSCRIRWTNYL 61 788*******************************************97 PP | |||||||
2 | Myb_DNA-binding | 42.5 | 1.5e-13 | 69 | 110 | 3 | 46 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 ++T+ E+el+v++++ G++ W Ia+ ++ gRt+k++k++w++ Pd.00g810000.m01 69 SFTPHEEELIVRLHATIGSR-WPIIAQQLP-GRTDKDVKNYWNT 110 79******************.*********.***********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 355 aa Download sequence |
MVRPACCEKL HLKRGLWTEE EDAKILAHGS KHGNINWTAF PKKAGLTRCG KSCRIRWTNY 60 LRPNLKHESF TPHEEELIVR LHATIGSRWP IIAQQLPGRT DKDVKNYWNT KLKKKLSEMG 120 IDHVTHKPFS QILADYGNIG GLPKAGMRMA IGSLNKDLKN AILMKPELPY SLSTQGFSNI 180 NSHLMPMTMI PIKREPIQDG FLSNQPFDLL TQLQAIRLVT EASNSTNLES SPPNLYIPEG 240 TLSSSPSSST CSSAAQEQAT LQAFSWSDFL LEDAFFPAGD AQEHEDKAEH SSMDMLNQSK 300 AAIPQSQIED QAGMQKYNEV EATSPCDSSF VEAMVARENE MFLEFPQLME EPFYY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G28470.1 | 4e-68 | MYB family protein |