PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g807130.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

HD-ZIP

Protein Properties

Length: 268aa MW: 30121.7 Da PI: 8.4063

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g807130.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	57.4	2.4e-18	98	152	2	56
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 rk+ ++tkeq Le+ F+++++++ ++++ LAk+l+L rqV vWFqNrRa+ k Pd.00g807130.m01 98 RKKLRLTKEQSLLLEDTFKEHNTLNPRQKQALAKQLNLRPRQVEVWFQNRRARTK 152 78889************************************************98 PP
2	HD-ZIP_I/II	124.1	6.4e-40	98	187	1	91
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 +kk+rl+keq+ lLE++F+e+++L+p++K++la++L+l+prqv+vWFqnrRARtk+kq+E+d+e Lkr++++l+e+n+rL+kev+eLr +l Pd.00g807130.m01 98 RKKLRLTKEQSLLLEDTFKEHNTLNPRQKQALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCELLKRCCEKLTEDNRRLQKEVQELR-AL 187 69*************************************************************************************9.55 PP

Sequence ? help Back to Top
Protein Sequence Length: 268 aa Download sequence
MEKPSQPMQN HQHRTSWNEI FQFPYRNPDA RSCLRGIDVN QAAEFEEENG VSSPNSTVSS 60 LSGKRSEREP IGDENEAERT SCSHGSDDED GNGGDLSRKK LRLTKEQSLL LEDTFKEHNT 120 LNPRQKQALA KQLNLRPRQV EVWFQNRRAR TKLKQTEVDC ELLKRCCEKL TEDNRRLQKE 180 VQELRALKLS PQLYMQMSPP TTLTMCPSCE RVAVSSLSSS AAAAASSTAP ANGQTCQSGA 240 HNVQRPIPIS PWATLPIQRR PLDASAPK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	97	103	SRKKLRL
2	147	155	RRARTKLKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G60390.1	1e-90	HD-ZIP family protein