PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g806610.m01
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 685aa    MW: 74705 Da    PI: 5.3323
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g806610.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH39.11.3e-12508553454
                       HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
               HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                       +h e+Er+RR+++N++f  Lr ++P+       K++Ka+ L  A+ YI++L
  Pd.00g806610.m01 508 NHVEAERQRREKLNQRFYALRAVVPNV-----SKMDKASLLGDAISYINEL 553
                       799***********************6.....5***************998 PP

Sequence ? help Back to Top
Protein Sequence    Length: 685 aa     Download sequence    
MTDYRIPPTM NLWTDDNASL MEAFMSSSDL TSFWAAPSAQ PTPQPAHPQA QPQSSASTSD  60
YPKAAAVAPS QPSITPFNQE TLMQRLQALI EGARESWTYA IFWQSSYDYS GGTVLGWGEG  120
FYKDERDKGK AKAKTTTSAA DQEYRKKVLR ELNSLISGAD TSADDAVVDQ EVTDTEWFFL  180
VSMTQSFVPG GGLPGQAFFH STPVWVAGPD RLAASHCERA RQGQAFGLQT LVCVPTANGV  240
VELGSTELIY QSSDLTNKVR VLFNFNNLEV GSWPMGGGGA DQGENDPSSL WINDPSSTTI  300
EVKDPVNMAP VTSAPTSTST QPVSKPIQFE SHQPSSSSLS ENPSAIQLQQ SQQQVQQQTQ  360
SFFTRELNFS DYGYDGSSVK NSNSNSLKPE SGEILSFGES KRSSYSANGK LFSGHSQIAA  420
AEDNNSKKKK SPPSRGSNDE GLLSFSSGVI LPSSGVVKSG GGGAADSDHS DLEASVVRET  480
DSSRVVDPEK RPRKRGRKPA NGREEPLNHV EAERQRREKL NQRFYALRAV VPNVSKMDKA  540
SLLGDAISYI NELKAKLQTV ESDKEDLQKQ LESMNQDLGC KDSSSLSDQD LKMSKHQASS  600
KLIDLDIDVK IIGWDAMIRI QCCKKNHPAA RLMASLKELD LDVHHASISV VNDLMIQQAT  660
VKMGSRIYTQ DQLRLALSSK IGDSW
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1490498KRPRKRGRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G32640.10.0bHLH family protein