PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g805820.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family HD-ZIP
Protein Properties Length: 780aa    MW: 87049.6 Da    PI: 5.2735
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g805820.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox681.2e-2198153156
                       TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
          Homeobox   1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                       +++ +++t++q++e+e+lF+++++p+ ++r++L+++lgL+ rqVk+WFqNrR+++k
  Pd.00g805820.m01  98 KKRYHRHTAHQIQEMENLFKECPHPDDKQRQKLSQELGLKPRQVKFWFQNRRTQMK 153
                       688999***********************************************998 PP
2START162.72.7e-513005272206
                       HHHHHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS............SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S.. CS
             START   2 laeeaaqelvkkalaeepgWvkss....esengdevlqkfeeskv...........dsgealrasgvvdmvlallveellddkeqWdetla.. 77 
                       la +  +elvk+ +a+ep+W + +    e +n +e+++ f++              +++ea r+s+vv+m++ +lv  +ld + +W e ++  
  Pd.00g805820.m01 300 LAASSVDELVKMCQAGEPLWIRNReigkEVLNVKEYTRMFPP--WplnlkhhssdqFRTEATRDSAVVIMNSINLVDCFLDAN-KWMELFPsi 389
                       6788899*****************666666666666666655..15699999***99**************************.********* PP

                       ..EEEEEEEECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE..TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTC CS
             START  78 ..kaetlevissg......galqlmvaelqalsplvp.RdfvfvRyirq.lgagdwvivdvSvdseqkppesssvvRaellpSgiliepksng 160
                         +a+t++vi+ +      g lqlm+aelq+lsplvp R+  f+Ry++q  ++g w+ivd  +ds  ++  +ss+ R ++lpSg+li++++ng
  Pd.00g805820.m01 390 vsRAKTVQVIQADpsgqanGSLQLMYAELQVLSPLVPtREAHFLRYCQQnAEEGCWAIVDFPIDSFHDNL-QSSFPRYKRLPSGCLIQDMPNG 481
                       *************************************************999****************98.9********************* PP

                       EEEEEEEE-EE--SSXXHHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS
             START 161 hskvtwvehvdlkgrlphwllrslvksglaegaktwvatlqrqcek 206
                       +sk+twveh++ +++ +h++l + v sg+a+ga++w+a lqrqce+
  Pd.00g805820.m01 482 YSKITWVEHAEIEEKPVHQILSHYVYSGMAFGAQRWLAILQRQCER 527
                       ********************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 780 aa     Download sequence    
MLEAKMYGDC QVMSTMGGGN VVTSETLFSS PIQNPNFNFM PSQLPFQPFS SIINPKEENG  60
LLMRGKEEMM ESGSGSEQVE EKSGNEQEAD QLQQPPKKKR YHRHTAHQIQ EMENLFKECP  120
HPDDKQRQKL SQELGLKPRQ VKFWFQNRRT QMKAQQDRSD NVMLRAENDS LKNENYRLQT  180
ALRNIICPNC GGPSMIEDIG LDEQQLRLEN ARLREELERV CCLSSRYTTG REIQTMAPGD  240
PLMSASSLDL DMNIYSRHFQ DPMTSCGDMI PMPLLPPEVP SNYNEGGVLL DEEKSLAVEL  300
AASSVDELVK MCQAGEPLWI RNREIGKEVL NVKEYTRMFP PWPLNLKHHS SDQFRTEATR  360
DSAVVIMNSI NLVDCFLDAN KWMELFPSIV SRAKTVQVIQ ADPSGQANGS LQLMYAELQV  420
LSPLVPTREA HFLRYCQQNA EEGCWAIVDF PIDSFHDNLQ SSFPRYKRLP SGCLIQDMPN  480
GYSKITWVEH AEIEEKPVHQ ILSHYVYSGM AFGAQRWLAI LQRQCERVAS LMARNISDLG  540
VIPSPEARKN LMKLSQRMIR TFCVNMSTSN GQSWTALSDS PDDTVRITTR KVTDPGQPIG  600
VILSAVSTTW LPYSHFRVFE LLRDEHRRAQ QLDVLSNGNS LHEVAHIANG SHPGNCISLL  660
RINVASNSAQ NVELMLQESC TDESGSLVVY TTMDVDGIQL AMSGEDPSCI PLLPLGTSPS  720
AKLNLSSVTA INNHLFNSVQ QIISALSGGS DTCIAAATTE NGSVGGGASC SDPTASSPRQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G46880.10.0HD-ZIP family protein