PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g794550.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family GRAS
Protein Properties Length: 547aa    MW: 59631.2 Da    PI: 4.8103
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g794550.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS451.65e-1381785381374
              GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkf 93 
                       lv++L++cAeav++++l+la+al++++  la++++ +m+++a+yf+eALa+r++r        + p+++ +++ s+ l++   f+e++P+lkf
  Pd.00g794550.m01 178 LVHTLVACAEAVQQENLKLADALVKHVGLLAASQAGAMRKVATYFAEALARRIYR--------IYPQDSLDSSYSDILQM--HFYETCPYLKF 260
                       689****************************************************........44555554445555444..5********** PP

              GRAS  94 shltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrl 186
                       +h+taNqaIlea+++++rvH+iDf+++qG+QWpaL+qaLa Rp+gpp +R+Tg+g+p+++++++l+++g++La++Ae++gv+fef+ +va++l
  Pd.00g794550.m01 261 AHFTANQAILEAFASASRVHVIDFGLKQGMQWPALMQALALRPGGPPAFRLTGIGPPQPDNTDALQQVGWKLAQLAETIGVEFEFRGFVANSL 353
                       ********************************************************************************************* PP

              GRAS 187 edleleeLrvkp..gEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpr 277
                       +dle+++L+++p   E++aVn+ ++lh ll++++++e+    vL+ +k ++Pk+v++veqea+hn++ Fl+rf eal+yys lfdsle +  +
  Pd.00g794550.m01 354 ADLEPSMLEIRPpdVETVAVNSCFELHPLLARPGAVEK----VLSSIKAMKPKIVTIVEQEANHNGPIFLDRFNEALHYYSNLFDSLEGS--S 440
                       ************999***********************....*********************************************999..5 PP

              GRAS 278 eseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvs 369
                         +++ ++++++lgr+i+nvvaceg++r+erhetl +Wr r+++aGF  v+l+++a kqa++ll+ ++ +dgyrvee+sgsl+lgW++rpL++
  Pd.00g794550.m01 441 GPSQDLVMSEVYLGRQICNVVACEGQDRVERHETLTQWRGRMDSAGFDLVHLGSNAFKQASMLLALFAgGDGYRVEENSGSLMLGWHTRPLIA 533
                       66999**************************************************************************************** PP

              GRAS 370 vSaWr 374
                       +SaW+
  Pd.00g794550.m01 534 TSAWQ 538
                       ****6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 547 aa     Download sequence    
MDELLAVLGY KVRASDMAEV AEKLEQLEMV MGSAQEDGIS QLSDTVHYNP SDLSGWVQSM  60
LSEFNTVDGS PIDDPLFVAA GSSSITSIHF SNSHQIENPA SRVFHDDSEY DLRAIPGVAA  120
YPQTHLDSEA ESRRKRLKTS IGSNSIGANS GVGVDSGSVS DPARPLVLVD SQETGVRLVH  180
TLVACAEAVQ QENLKLADAL VKHVGLLAAS QAGAMRKVAT YFAEALARRI YRIYPQDSLD  240
SSYSDILQMH FYETCPYLKF AHFTANQAIL EAFASASRVH VIDFGLKQGM QWPALMQALA  300
LRPGGPPAFR LTGIGPPQPD NTDALQQVGW KLAQLAETIG VEFEFRGFVA NSLADLEPSM  360
LEIRPPDVET VAVNSCFELH PLLARPGAVE KVLSSIKAMK PKIVTIVEQE ANHNGPIFLD  420
RFNEALHYYS NLFDSLEGSS GPSQDLVMSE VYLGRQICNV VACEGQDRVE RHETLTQWRG  480
RMDSAGFDLV HLGSNAFKQA SMLLALFAGG DGYRVEENSG SLMLGWHTRP LIATSAWQLA  540
SSTESTR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G03450.10.0GRAS family protein