PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g791960.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 188aa MW: 21640.7 Da PI: 9.8314 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 38.4 | 2.1e-12 | 64 | 92 | 28 | 56 |
HHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 28 eereeLAkklgLterqVkvWFqNrRakek 56 ++++ LA++l+L++rqV vWFqNrRa+ k Pd.00g791960.m01 64 ARKQSLAEQLNLKQRQVEVWFQNRRARTK 92 6899***********************98 PP | |||||||
2 | HD-ZIP_I/II | 82 | 9.2e-27 | 62 | 126 | 25 | 90 |
HD-ZIP_I/II 25 eperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLree 90 + rK++la++L+l++rqv+vWFqnrRARtk+kq+E+d+e+ k+++++l +en+rL+ke +eL+ + Pd.00g791960.m01 62 NGARKQSLAEQLNLKQRQVEVWFQNRRARTKLKQTEVDCEFWKKRCESLGNENRRLKKELQELK-S 126 6789***********************************************************9.4 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 188 aa Download sequence |
MRKKENPLVC LDLSFALCPK QEVASLGDRM ENRSSLRAMD EDEESERSID TNNKSIIMNN 60 KNGARKQSLA EQLNLKQRQV EVWFQNRRAR TKLKQTEVDC EFWKKRCESL GNENRRLKKE 120 LQELKSLNKN GASPLYIQIP KATMLSMCPS CERMVKAHHQ DQAAAKNTED LNVVRKSNKL 180 QGGFDGTN |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 87 | 95 | RRARTKLKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37790.1 | 1e-38 | HD-ZIP family protein |