PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Pd.00g791760.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
|
||||||||
Family | TCP | ||||||||
Protein Properties | Length: 148aa MW: 16878.9 Da PI: 10.5527 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 78.6 | 1.7e-24 | 11 | 58 | 2 | 49 |
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktie 49 a+kk +++++h+kv+gR+RR+R+++ caar+F+L++eLG+++d++ti+ Pd.00g791760.m01 11 AVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTID 58 78*********************************************7 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 148 aa Download sequence |
MLRPSSNGVL AVKKPPSKDR HSKVDGRGRR IRMPIICAAR VFQLTRELGH KSDGQTIDNS 60 RWARPQRPEW EIIFQDISIC WLLCRAGTGI LVGEKTTRVE DPDYRPSVSG GWFVLVVVCF 120 VGIYKYVFVA CKKKKACWMK LGQLCKQN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G08330.1 | 3e-28 | TCP family protein |