PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g787410.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB_related

Protein Properties

Length: 569aa MW: 61014.7 Da PI: 9.4236

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g787410.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	24.2	7.7e-08	200	244	1	44
TSSS-HHHHHHHHHHHHHTTTT-HHHHHH..HHTTTS-HHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIar..tmgkgRtlkqcksrw 44 r++W++ Ed l+ av++ G g+W+ I r g Rt+ q+ rw Pd.00g787410.m01 200 RKKWSEAEDFELIAAVQKCGEGNWANILRadFKG-DRTAGQLSQRW 244 789************************8721344.78888887777 PP

Sequence ? help Back to Top
Protein Sequence Length: 569 aa Download sequence
MFYHRRRYSH SLTKGRYTAT TVLALLQEVA HWPEAKIDWI RLVAKTSTGI SNAREYQMLW 60 RHLAYREALV DKFDNGSEPL DDDNDLEYEL EAFPAVCGEA STEAAACVKV LIASGLPSDS 120 SHRNGTTVEA PLTIKIPNGQ PSRTHENSEP TCSMQGKNIT VPVSVKKQPL PAATTSSVAT 180 ADGGDANGSA SNSMASRKKR KKWSEAEDFE LIAAVQKCGE GNWANILRAD FKGDRTAGQL 240 SQRWAIIKKR NQELNLRGNS SGKLSEAQLA ARHSLSVALN MPNLTAKTIG TAGTNAHNKF 300 ARKVATSNSV LTTGAKAEPQ SQQDLKPTKK PYQMELLGST TKSRVTSKNT LTKPNCNDDD 360 KVRAIAVAAG ARIASPSDAA SLLKAAQAKN AVHIMPTGGS SIQSSLPSGM STHSEPHPNL 420 HMRTGLAGIT LSTPPPTDVT PSAVHPGSSK ALPLMSQHTP TNGTLLSKQI KGVSCSLDAK 480 LPSKQEVRTE VGSVIAELGC TPIVLAQDEA VISRNGQDEQ VKDDKVDSPN QKAELKILSS 540 NAENPVSSLN IERDETHHKA VISVQGEQR

Sequence ? help Back to Top

Protein Sequence Length: 569 aa Download sequence

MFYHRRRYSH SLTKGRYTAT TVLALLQEVA HWPEAKIDWI RLVAKTSTGI SNAREYQMLW  60
RHLAYREALV DKFDNGSEPL DDDNDLEYEL EAFPAVCGEA STEAAACVKV LIASGLPSDS  120
SHRNGTTVEA PLTIKIPNGQ PSRTHENSEP TCSMQGKNIT VPVSVKKQPL PAATTSSVAT  180
ADGGDANGSA SNSMASRKKR KKWSEAEDFE LIAAVQKCGE GNWANILRAD FKGDRTAGQL  240
SQRWAIIKKR NQELNLRGNS SGKLSEAQLA ARHSLSVALN MPNLTAKTIG TAGTNAHNKF  300
ARKVATSNSV LTTGAKAEPQ SQQDLKPTKK PYQMELLGST TKSRVTSKNT LTKPNCNDDD  360
KVRAIAVAAG ARIASPSDAA SLLKAAQAKN AVHIMPTGGS SIQSSLPSGM STHSEPHPNL  420
HMRTGLAGIT LSTPPPTDVT PSAVHPGSSK ALPLMSQHTP TNGTLLSKQI KGVSCSLDAK  480
LPSKQEVRTE VGSVIAELGC TPIVLAQDEA VISRNGQDEQ VKDDKVDSPN QKAELKILSS  540
NAENPVSSLN IERDETHHKA VISVQGEQR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	198	202	KKRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G09710.2	8e-70	MYB_related family protein