PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g778630.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family MYB
Protein Properties Length: 335aa    MW: 37268.6 Da    PI: 7.0039
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g778630.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding55.99.5e-181461148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                      +g+WT+eEd +lv +++++G+g+W++++   g++R+ k+c++rw +yl
  Pd.00g778630.m01 14 KGPWTPEEDIILVSYIQEHGPGNWRAVPTNTGLHRCSKSCRLRWTNYL 61
                      79********************************************97 PP
2Myb_DNA-binding48.42.2e-1567112148
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                       rg++T  E++ ++++ ++lG++ W++Ia++++  Rt++++k++w+++l
  Pd.00g778630.m01  67 RGNFTDHEEKMIIHLQALLGNR-WAAIASYLP-QRTDNDIKNYWNTHL 112
                       89********************.*********.************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 335 aa     Download sequence    
MGRPPCCDKE GVKKGPWTPE EDIILVSYIQ EHGPGNWRAV PTNTGLHRCS KSCRLRWTNY  60
LRPGIKRGNF TDHEEKMIIH LQALLGNRWA AIASYLPQRT DNDIKNYWNT HLKKKLNKLQ  120
AGTEGHSKDQ GSSISSQAIS RGQWERRLQT DIHMARQALR DALSPEKPST LSSDLKPADG  180
FLISTTKPAQ DQSTATYASS TENISRLLKG WMKNPPKSSS ARTNLAKTQH SFTNMVSGFD  240
CTSSEGATSA ANTTSGVELS DAFESLFGFE SLDYSNSDLS PSMSPEASLF QDESKPTLIS  300
DQFLSLIDKW IFDEDAAAIQ GKDMMTLDHE NANFF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G28910.11e-113MYB family protein