PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g771890.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

ARF

Protein Properties

Length: 752aa MW: 83602.2 Da PI: 7.0882

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g771890.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	79.5	3.5e-25	104	205	1	99
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-S CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldg 86 f k+ltpsd+++ g +++p+ +a+++ +++ + tl+++d++g +W++++iyr++++r++lt+GW++Fv+ + L +gD+vvF+ + Pd.00g771890.m01 104 FAKILTPSDANNGGGFSVPRFCADSIfpalnyqAEPPVQ--TLSVTDLHGVVWDFRHIYRGTPRRHLLTTGWSKFVNHKMLVAGDSVVFM--R 192 89*******************999985444444..9********************************************..6 PP SSEE..EEEEE-S CS B3 87 rsefelvvkvfrk 99 +s++e++v+v+r+ Pd.00g771890.m01 193 NSRGEMFVGVRRA 205 69999***996 PP
2	Auxin_resp	53.5	1e-18	244	300	28	83
Auxin_resp 28 vekvekalkvkvsvGmRfkmafetedsserrl.sGtvvgvsdldpvrWpnSkWrsLk 83 +e vekal+v +s+GmR+km++etedss+ ++ +Gt ++vs d+ W++S+Wr+L+ Pd.00g771890.m01 244 AEVVEKALNVFWSAGMRVKMSVETEDSSRMTWfQGTLSSVSIPDNGPWQRSPWRMLQ 300 67899**************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 752 aa Download sequence
MPPTPHPPSH HHPHSHSYSP HRPIDPKIWR ACAGNSVQIP ILHSRPLILC RISAVHFLPD 60 PTTDEVFAKL LLLPIPNYEP TNRHEPPNDD VFDDADETDK VVSFAKILTP SDANNGGGFS 120 VPRFCADSIF PALNYQAEPP VQTLSVTDLH GVVWDFRHIY RGTPRRHLLT TGWSKFVNHK 180 MLVAGDSVVF MRNSRGEMFV GVRRAVRSTV SSDCASRWSS HISGGATTTM RLKTEDQEGS 240 GRKAEVVEKA LNVFWSAGMR VKMSVETEDS SRMTWFQGTL SSVSIPDNGP WQRSPWRMLQ 300 VTWDEPEVLQ NAKRVSPWQV DYVASTPSIH TAFPPAKRFR APMSPGLLTN AEEEFFFPVP 360 GAPNSTMGQL NASLLNYNTF PAGMQGARQD LYCVSNLSQL LSENTPQMCT YNSFGNNVVP 420 KLKRVSTELN IGSSQSDELS PDSQSSVHSF GTELDGNRYC NSTKVGRSSF QLFGKIIYMN 480 QPVEGGFDDV GCTEDNGNKG YNATEAPRDS VPPTNAKEDR TRSNVEASES GADQHHLPRL 540 RTLLKVYKEA IFNGDEETVS EVEAKIEILE NEKNKLVKKV SSSSAEITSG KEKFIRLQAD 600 FDNCRKRFEK ERLTVRTDAQ EEVIESLLPM VDNFERAKQY IKPETDKEKK IDASYQGIYK 660 QLVETMKSLH VAVVPTVGKS FDPSLHEAVA REESQEFKEG IIIQEIRRGF LLGGRLLRPA 720 MVKVSTGPGS KKAPVATEKS SGLPATAAGV EK

Sequence ? help Back to Top

Protein Sequence Length: 752 aa Download sequence

MPPTPHPPSH HHPHSHSYSP HRPIDPKIWR ACAGNSVQIP ILHSRPLILC RISAVHFLPD  60
PTTDEVFAKL LLLPIPNYEP TNRHEPPNDD VFDDADETDK VVSFAKILTP SDANNGGGFS  120
VPRFCADSIF PALNYQAEPP VQTLSVTDLH GVVWDFRHIY RGTPRRHLLT TGWSKFVNHK  180
MLVAGDSVVF MRNSRGEMFV GVRRAVRSTV SSDCASRWSS HISGGATTTM RLKTEDQEGS  240
GRKAEVVEKA LNVFWSAGMR VKMSVETEDS SRMTWFQGTL SSVSIPDNGP WQRSPWRMLQ  300
VTWDEPEVLQ NAKRVSPWQV DYVASTPSIH TAFPPAKRFR APMSPGLLTN AEEEFFFPVP  360
GAPNSTMGQL NASLLNYNTF PAGMQGARQD LYCVSNLSQL LSENTPQMCT YNSFGNNVVP  420
KLKRVSTELN IGSSQSDELS PDSQSSVHSF GTELDGNRYC NSTKVGRSSF QLFGKIIYMN  480
QPVEGGFDDV GCTEDNGNKG YNATEAPRDS VPPTNAKEDR TRSNVEASES GADQHHLPRL  540
RTLLKVYKEA IFNGDEETVS EVEAKIEILE NEKNKLVKKV SSSSAEITSG KEKFIRLQAD  600
FDNCRKRFEK ERLTVRTDAQ EEVIESLLPM VDNFERAKQY IKPETDKEKK IDASYQGIYK  660
QLVETMKSLH VAVVPTVGKS FDPSLHEAVA REESQEFKEG IIIQEIRRGF LLGGRLLRPA  720
MVKVSTGPGS KKAPVATEKS SGLPATAAGV EK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G77850.1	1e-152	ARF family protein