PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g769570.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family HD-ZIP
Protein Properties Length: 334aa    MW: 37755.2 Da    PI: 4.9175
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g769570.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox65.76.4e-2177130356
                       --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
          Homeobox   3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                       k++++t++q++ Le+ Fe ++++  e++++LAkklgL+ rqV vWFqNrRa++k
  Pd.00g769570.m01  77 KKRRLTPDQVHMLEKSFETENKLEPERKTQLAKKLGLQPRQVAVWFQNRRARWK 130
                       5678*************************************************9 PP
2HD-ZIP_I/II1352.5e-4376167192
       HD-ZIP_I/II   1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 
                       ekkrrl+ +qv++LE+sFe+e+kLeperK++la++LglqprqvavWFqnrRAR+ktkqlE+dy+ Lk++yd+l ++ +++ ke+++L++e+ 
  Pd.00g769570.m01  76 EKKRRLTPDQVHMLEKSFETENKLEPERKTQLAKKLGLQPRQVAVWFQNRRARWKTKQLERDYDLLKSSYDSLLSNYDSILKENHKLKSEVV 167
                       69**************************************************************************************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 334 aa     Download sequence    
MEPCRFFFDP STTSSACQQG GGNMLFLGNA DHVFRGPRSV MGLMDQESSR RRSFFSSSSS  60
QDELFDEEYY DEQLPEKKRR LTPDQVHMLE KSFETENKLE PERKTQLAKK LGLQPRQVAV  120
WFQNRRARWK TKQLERDYDL LKSSYDSLLS NYDSILKENH KLKSEVVSIN QKLEAKEETS  180
NIKAAAFAPD HADDDKCDPH VPAGDEMRDA VPISYAAGLQ YSCSVKVEDR LSSGSGGSAV  240
VDEAEGPQLV DSGDSYNFLN EDNLKVEGRG LQWEQVVAKR PDMFHLSSQL FSCTQRDAEN  300
GVPEVEREGT SCFALLGLCQ LRDTPRLVIT CKII
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1125133RRARWKTKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G01470.17e-60HD-ZIP family protein