PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g765600.m02
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family GRAS
Protein Properties Length: 408aa    MW: 46361.9 Da    PI: 7.3753
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g765600.m02genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS297.82.7e-91234041373
              GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkf 93 
                       l++ Ll  A+av++++ + a + L++l + +s  gd++qR++ayf+ +Laarl+   s  ++ +  ++ts    +ee+ a++ ++ vsP+++f
  Pd.00g765600.m02  23 LIHMLLITATAVNENNVSSALENLSELYKSVSLCGDSVQRVVAYFADGLAARLLTRKSPFFDMIMKEPTS----EEEFVAFTSLYRVSPYYQF 111
                       6899***************************************************999999888777775....78889999*********** PP

              GRAS  94 shltaNqaIleavege.....ervHiiDfdisqGlQWpaLlqaLasRp..egppslRiTgvgspesgskeeleetgerLakfAeel.gvpfef 178
                       +h+taNqaI ea+e+e     +++H+iDfd+s+G+QWp+L+q+L++++  ++  slRiTg+g+    s +el+et++rL +f + + ++ fef
  Pd.00g765600.m02 112 AHFTANQAIIEAFEKEeeknnRALHVIDFDVSYGFQWPSLIQSLSEKAtsGNRISLRITGFGQ----SLDELRETENRLMSFSKGFrNLIFEF 200
                       **************9977777788**********************99755566*********....9****************97579**** PP

              GRAS 179 nvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsl 271
                       + l    l   +l +Lr k++E++aVnlv++l +l  +s+++++     Lk v  l+P +v++veqe +++  +Fl rf+e+l+y++a+fdsl
  Pd.00g765600.m02 201 QGL----LRGSKLINLRKKRNETIAVNLVFHLNTLS-NSLKISD----SLKSVHILNPSIVILVEQEGSRSPRNFLSRFMESLHYFAAMFDSL 284
                       **8....66667789*****************9997.6666666....9******************************************** PP

              GRAS 272 eaklpreseerikvErellgreivnvvacegae.rrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk......sdg......... 348
                       +  lp es er ++E+  lg+ei++++   +++    + e++e+W++r+e+ GF+ ++ls+k   qa+lll+         +dg         
  Pd.00g765600.m02 285 DDCLPLESAERLSIEKNHLGKEIKSMLNYDNDDvNCSKIEKMETWKARMESHGFEGINLSSKSKIQARLLLKIRThycplqFDGessggstag 377
                       *****************************9999788999*******************************97433101011222222222223 PP

              GRAS 349 yrveee.sgslv.lgWkdrpLvsvSaW 373
                       ++v e+ +g  + lgW+dr L++vSaW
  Pd.00g765600.m02 378 FKVFERnDGRTIsLGWQDRYLLTVSAW 404
                       5554444444446************** PP
Sequence ? help Back to Top
Protein Sequence    Length: 408 aa     Download sequence    
MLKLDHKKKG GHVLDEDGKG LHLIHMLLIT ATAVNENNVS SALENLSELY KSVSLCGDSV  60
QRVVAYFADG LAARLLTRKS PFFDMIMKEP TSEEEFVAFT SLYRVSPYYQ FAHFTANQAI  120
IEAFEKEEEK NNRALHVIDF DVSYGFQWPS LIQSLSEKAT SGNRISLRIT GFGQSLDELR  180
ETENRLMSFS KGFRNLIFEF QGLLRGSKLI NLRKKRNETI AVNLVFHLNT LSNSLKISDS  240
LKSVHILNPS IVILVEQEGS RSPRNFLSRF MESLHYFAAM FDSLDDCLPL ESAERLSIEK  300
NHLGKEIKSM LNYDNDDVNC SKIEKMETWK ARMESHGFEG INLSSKSKIQ ARLLLKIRTH  360
YCPLQFDGES SGGSTAGFKV FERNDGRTIS LGWQDRYLLT VSAWNCVP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G03450.13e-53GRAS family protein