PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g757040.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family HD-ZIP
Protein Properties Length: 299aa    MW: 33271.3 Da    PI: 7.3434
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g757040.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox57.22.9e-18129183256
                       T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
          Homeobox   2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                       rk+ ++tkeq   Le+ F+++++++ ++++ LAk+l+L  rqV vWFqNrRa+ k
  Pd.00g757040.m01 129 RKKLRLTKEQSLLLEDTFKEHNTLNPRQKQALAKQLNLRPRQVEVWFQNRRARTK 183
                       78889************************************************98 PP
2HD-ZIP_I/II123.88e-40129218191
       HD-ZIP_I/II   1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 
                       +kk+rl+keq+ lLE++F+e+++L+p++K++la++L+l+prqv+vWFqnrRARtk+kq+E+d+e Lkr++++l+e+n+rL+kev+eLr +l
  Pd.00g757040.m01 129 RKKLRLTKEQSLLLEDTFKEHNTLNPRQKQALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCELLKRCCEKLTEDNRRLQKEVQELR-AL 218
                       69*************************************************************************************9.55 PP
Sequence ? help Back to Top
Protein Sequence    Length: 299 aa     Download sequence    
MGEKDDGLGL GLSLSLGCKP NENESSLHLN LMEKPSQPMQ NHQHRTSWNE IFQFPDRNPD  60
ARSCLRGIDV NQAADFEEEN AVSSPNSTVS SLSGKRSERE PIGDENEAER TSCSHGSDDE  120
DGNGGDLSRK KLRLTKEQSL LLEDTFKEHN TLNPRQKQAL AKQLNLRPRQ VEVWFQNRRA  180
RTKLKQTEVD CELLKRCCEK LTEDNRRLQK EVQELRALKL SPQLYMQMSP PTTLTMCPSC  240
ERVAVSSLSS SAAAAASSTA PANGQTCQSG APNIQRPIPI SPWATLPIQR RPLDASAPK
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1128134SRKKLRL
2178186RRARTKLKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G60390.14e-92HD-ZIP family protein