PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g747970.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | MYB_related | ||||||||
Protein Properties | Length: 211aa MW: 24073.7 Da PI: 5.6903 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 54.8 | 2.1e-17 | 26 | 69 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+ T++Ed+l++++++++G++ W+ Ia++++ gRt++++k++w++ Pd.00g747970.m01 26 RGNYTQQEDDLILKLHEEFGNK-WSMIAAKLP-GRTDNEIKNHWNT 69 899*******************.*********.***********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 211 aa Download sequence |
MITGISRCGK SCRLRWTNYL RPGVKRGNYT QQEDDLILKL HEEFGNKWSM IAAKLPGRTD 60 NEIKNHWNTR FKKLTKRNPT SSQLAKEQPC KHESSPTVTS QNTELGAQSG PKFDASVHQI 120 LESSPLSPET FSSDSSSLSS NQASASTTTS WFNESSGDFW TEPFQLYVQS NYPVNYMREE 180 EVLSSPSLTF YDMGDMDLFY QVMPTWQENI D |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38620.1 | 3e-38 | MYB family protein |