PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g747960.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family MYB
Protein Properties Length: 280aa    MW: 31765 Da    PI: 4.8917
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g747960.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding51.81.8e-161461148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                      +g WT+eEd +l+ +v+++G  +W+  +r  g+ R++k+c++rw +yl
  Pd.00g747960.m01 14 KGTWTPEEDRKLIAYVTRYGCWNWRQLPRFAGLSRCGKSCRLRWMNYL 61
                      799*****************99************************97 PP
2Myb_DNA-binding58.81.2e-1867111147
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                       rg+ ++eE+e ++++++qlG++ W++Ia+ ++ gRt++++k++w++ 
  Pd.00g747960.m01  67 RGNYSQEEEETIIKLHQQLGNR-WSAIAAQLP-GRTDNEIKNHWHTN 111
                       899*******************.*********.***********986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 280 aa     Download sequence    
MVRTPCRDEN GMKKGTWTPE EDRKLIAYVT RYGCWNWRQL PRFAGLSRCG KSCRLRWMNY  60
LRPNIKRGNY SQEEEETIIK LHQQLGNRWS AIAAQLPGRT DNEIKNHWHT NLKKRMNNKH  120
YNPSSSSSSS SSSSSSSVTQ TDDQETPNCS GLVELAVDQL TKNATILPNA DETADHLQVP  180
QTDHDHLDNI FQLSSSPQPS SSEVSSLTTD NAAVVLSSVN NDNWVNYVEE DNVISSMEAF  240
ADVQFGDDFW TEPFLADTSY IPCGLSTLSM DSEFFYPPFY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G28110.15e-58MYB family protein