PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g747510.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 321aa    MW: 35893.3 Da    PI: 5.5704
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g747510.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH130.000191742141055
                       HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH  10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                       r RR+++ ++   L +llP +     +K++ a++ e+A +Y+k Lq
  Pd.00g747510.m01 174 RGRRQKLSDKTRCLEKLLPLD-----RKMDTATVFEEAYKYVKFLQ 214
                       99******************9.....8******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 321 aa     Download sequence    
MEDSELVMLM RSLLAKAQEE INTTNTWEAE AEEVPTFTAM LSSAGVSLHS FLSTTAAHDD  60
PLDPNAMSSS SSLMPLPFSE FAQDTLITTT PTRSPTTTFN FTTAAEADYI QTQMQSPILR  120
LPKQEPISNY QDYFPIPSPS NTNVSTSPPF YHLHQQQYQF YNNPPDLNLD SLARGRRQKL  180
SDKTRCLEKL LPLDRKMDTA TVFEEAYKYV KFLQAQVTAL QAMPVVTPNT SAAASATGFD  240
DGHLSPMSSR TTGGLERLSR NQLLQVLLNS PVAQTFMYSQ GCCVFSVEQL AKFNCSRSSR  300
TLNLLRHYYP HLFFDSHSPT N
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G22100.15e-25bHLH family protein