PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g744670.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

SBP

Protein Properties

Length: 371aa MW: 41222.8 Da PI: 9.9991

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g744670.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	131.8	2.4e-41	216	293	1	78
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +Cq+egC+adls+ak+yhrrhkvCe+hska++v+++gl+qrfCqqCsrfh l efD++krsCrrrLa+hn+rrrk+q+ Pd.00g744670.m01 216 RCQAEGCTADLSHAKHYHRRHKVCEFHSKASTVIANGLTQRFCQQCSRFHLLPEFDNGKRSCRRRLADHNRRRRKTQQ 293 6**************************************************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 371 aa Download sequence
MRKRVRIGRK VAADTTTISE FFSFPKKDLV GKGAPAKTHY IITKMLDYEW GNPSTVMLSP 60 DNDPGSDPTR HHHNTTTIFD HYASQASQAS AFNNLVPPPP PPQQQSHHAA FAHHFNSAQA 120 QQLHSIYDTH AYASASAYAP PNHHPLLSLD PIHGGAAHGL ILVPKSEDLC RPVDFASRIG 180 LNLGGRTYFS SEDDFMNRLY RRTRPATETG SNHAPRCQAE GCTADLSHAK HYHRRHKVCE 240 FHSKASTVIA NGLTQRFCQQ CSRFHLLPEF DNGKRSCRRR LADHNRRRRK TQQTNQENHN 300 SQVQQLVENA RNSSSDNVAR SPPQSAAHSA SSVTVALSPP RMTLDCFRQR PYQAAATTSS 360 GSSSSLFFSS G

Sequence ? help Back to Top

Protein Sequence Length: 371 aa Download sequence

MRKRVRIGRK VAADTTTISE FFSFPKKDLV GKGAPAKTHY IITKMLDYEW GNPSTVMLSP  60
DNDPGSDPTR HHHNTTTIFD HYASQASQAS AFNNLVPPPP PPQQQSHHAA FAHHFNSAQA  120
QQLHSIYDTH AYASASAYAP PNHHPLLSLD PIHGGAAHGL ILVPKSEDLC RPVDFASRIG  180
LNLGGRTYFS SEDDFMNRLY RRTRPATETG SNHAPRCQAE GCTADLSHAK HYHRRHKVCE  240
FHSKASTVIA NGLTQRFCQQ CSRFHLLPEF DNGKRSCRRR LADHNRRRRK TQQTNQENHN  300
SQVQQLVENA RNSSSDNVAR SPPQSAAHSA SSVTVALSPP RMTLDCFRQR PYQAAATTSS  360
GSSSSLFFSS G

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G02065.1	7e-56	SBP family protein