PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Pd.00g738960.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
|
||||||||
Family | TCP | ||||||||
Protein Properties | Length: 192aa MW: 20311.6 Da PI: 7.7742 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 90.4 | 3.9e-28 | 1 | 108 | 24 | 112 |
TCP 24 lsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg........................... 88 ++a+caar+F+L++eLG+++d++tieWLlqqa+pa++++tgt++++a+++ + s +ss+s+ s + Pd.00g738960.m01 1 MPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFTsLNISLRSSGSSMSVPsqlrssyyspnfsvhqnqrrslfqgig 93 9**********************************************9998777777777755555444555555555555555333333333 PP TCP 89 ..kaaksaakskksqksaasalnlak 112 + ++s+++ ln++ Pd.00g738960.m01 94 lsS-----------SDSSSTLLNFQT 108 331...........333333333333 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 192 aa Download sequence |
MPALCAARVF QLTRELGHKS DGETIEWLLQ QAEPAVIAAT GTGTIPANFT SLNISLRSSG 60 SSMSVPSQLR SSYYSPNFSV HQNQRRSLFQ GIGLSSSDSS STLLNFQTNS MHASMLQAKQ 120 ELRDTVSLDL SETASGEGSM GGRKRRPPEQ DLNQMGGGGG GGGGGYLLQS STGAVPASHH 180 HSQIPANFWM VA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G69690.1 | 6e-30 | TCP family protein |