PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g738060.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | C2H2 | ||||||||
Protein Properties | Length: 540aa MW: 59879 Da PI: 8.3659 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 11.2 | 0.0012 | 371 | 393 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ C+k+F++ L H +H Pd.00g738060.m01 371 FECTTCNKVFRSYQALGGHRASH 393 89**********99999998887 PP | |||||||
2 | zf-C2H2 | 10.9 | 0.0015 | 450 | 472 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + Cp+C k+F++ L H r+H Pd.00g738060.m01 450 HACPICLKVFPSGQALGGHKRSH 472 67******************999 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 540 aa Download sequence |
MELEDQQFKH LCKFCSKSFP CGRSLGGHMR SHLTNNSAET EEKLIIGKVK LPSANNVNSD 60 FETGPHHQPG YGLRENPKKT WRLADSSEDT SLLPDKFCRE CGKGFQSWKA LFGHMKCHSE 120 KERVVNSINS FDEEEEEDSW TCANQKLVMD SQSDNETTTP NRRRRSRQRR TRYMGTTTSS 180 SNFSIANAAT SSVSEIEQEQ EEVALCLMML KRDAGHCGGL KFVAHDSSDN NSVFSEAPSS 240 GRTNRVNADI KGKVSVCSGI EILKLKKKLN KKTLELGNLD SDFSKHGSRM KKEELLSAVG 300 FSKNDKLDKK MELAQPQLGS NNKCNSSKRK FQESYDFESR SEQSLKTLST TRGDVLDSEA 360 VCKSSQKRSK FECTTCNKVF RSYQALGGHR ASHKKIKGCF ASKVQSSENT IETDLSPEPT 420 SDSKLSKSCN NENPIEHDVK AEISTENKGH ACPICLKVFP SGQALGGHKR SHLIGGSAEN 480 KNSQTIVIQK PAAPEARDFL DLNLPAPVEE ESSSSHAAAF KPWWVGSSHK HEALVGLISN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G26610.1 | 3e-52 | C2H2 family protein |