PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g736990.m02
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family MYB_related
Protein Properties Length: 704aa    MW: 77785.9 Da    PI: 8.753
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g736990.m02genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding23.21.6e-07606655147
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHH CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqky 47 
                       r +++  E e lv+av++lG+g+W+ +  +     k+Rt  ++k++w ++
  Pd.00g736990.m02 606 RRPFSVAEVEALVQAVEKLGTGRWRDVKLRAFdnaKHRTYVDLKDKWKTL 655
                       6789999*******************9988889**************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 704 aa     Download sequence    
MGEEKVWMCF ELLAKNRCAE EFLFLDSESW QLKRLDYGFN GYQVPATPRA TRSARRRGAI  60
RKRVDDNSMG AFDLLATIAG KLLLEGESSP ASSHTSKDQC AGTKENCLDG DKPLKVEPCD  120
QGSCDRRIPV SDHISQGPNQ SSCSKESPVH QNESSVMTTS NCSERFASDM LVSGKCKNET  180
GSFTSKIEAG SSGCREAGEF KLDGEVKTLI KDETNKSAKV LIGTGPDMCG LEDPVVWEGE  240
PPALVSSDSS TKVPMYVDHI PQRSFPTSRD DVKVVSRDDD ENSSGCTHPV TSIKYSRPAP  300
LRIGDRRIRK ILASKYWKVA PKLKDDIHSN SYRDQKPNYH NRKNCYKRQR SQMNIPFKKR  360
KLFDRSAVLN IDEGIRREGF FDSRGKGITG DASCSKMQGA AMNSSSLAGQ HSSFQSRSSH  420
VKLRIKSFRV PELFIEIPDT ATVGSLKKTV MDAVTAVLGG GVCVGVLLQG KKVRDDNKTL  480
LQTGISQDNQ LDSLGFTLEP NSSQTPPPLC SGDSPHMLPC DVLQPLTRYP SGPTSEASPE  540
PHTASLGNFI ESDHDSAPSP TDMSAEKSTT DSKALVAVPD MSVEALAVVP GHRKSKRFDI  600
GQRRIRRPFS VAEVEALVQA VEKLGTGRWR DVKLRAFDNA KHRTYVDLKD KWKTLVHTAR  660
ISPQQRRGEP VPQELLDRVL TAHAYWSQQQ AKQQLKQPET CLLV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07540.11e-116MYB_related family protein